RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CYFIP1Q7L576 1253 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 TMC7Q7Z402 723 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 TRIM50Q86XT4 487 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 COLGALT1Q8NBJ5 622 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 CHAMP1Q96JM3 812 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 SMOC2Q9H3U7 446 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
NUP50-209ENST00000432340 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
NUP50-209ENST00000432340 ERAP1Q9NZ08 941 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 CDV3Q9UKY7 258 aaKnown RBP18.27■□□□□ 0.52
NUP50-209ENST00000432340 PADI3Q9ULW8 664 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 DUSP12Q9UNI6 340 aa18.27■□□□□ 0.52
NUP50-209ENST00000432340 MYH7P12883 1935 aa18.27■□□□□ 0.51
NUP50-209ENST00000432340 MBLAC1A4D2B0 266 aaPredicted RBP18.26■□□□□ 0.51
NUP50-209ENST00000432340 RRN3P2A6NIE6 340 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 KINO60870 393 aaKnown RBP18.26■□□□□ 0.51
NUP50-209ENST00000432340 EOMESO95936 686 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 NPR3P17342 541 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
NUP50-209ENST00000432340 ALX1Q15699 326 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 GRIK4Q16099 956 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 RTN4RL1Q86UN2 441 aaPredicted RBP18.26■□□□□ 0.51
NUP50-209ENST00000432340 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 SENP7Q9BQF6 1050 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 ERVK-5Q9HDB9 667 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 TRPV2Q9Y5S1 764 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 HCFC2Q9Y5Z7 792 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 TTC3P53804 2025 aa18.26■□□□□ 0.51
NUP50-209ENST00000432340 CEP250Q9BV73 2442 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 ZNF292O60281 2723 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 GCOM1H8Y6P7 765 aaPredicted RBP18.25■□□□□ 0.51
NUP50-209ENST00000432340 POLR2MP0CAP2 368 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 MFSD6Q6ZSS7 791 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 IQCA1Q86XH1 822 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 ESR2Q92731 530 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 RTKNQ9BST9 563 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 KAT14Q9H8E8 782 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 ZBTB40Q9NUA8 1239 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 IGSF9Q9P2J2 1179 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 NCDNQ9UBB6 729 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 WNT16Q9UBV4 365 aa18.25■□□□□ 0.51
NUP50-209ENST00000432340 IGSF9BQ9UPX0 1349 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 SPATA31C2B4DYI2 1134 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 HOXA2O43364 376 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 PARP1P09874 1014 aaKnown RBP18.24■□□□□ 0.51
NUP50-209ENST00000432340 CCDC149Q6ZUS6 474 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 PNMA1Q8ND90 353 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
NUP50-209ENST00000432340 CPVLQ9H3G5 476 aa18.24■□□□□ 0.51
NUP50-209ENST00000432340 TYW1Q9NV66 732 aaKnown RBP18.24■□□□□ 0.51
NUP50-209ENST00000432340 DENND3A2RUS2 1198 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 HIDE1A8MVS5 230 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 SLC24A5Q71RS6 500 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 MIER1Q8N108 512 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 MRPL43Q8N983 215 aaKnown RBP18.23■□□□□ 0.51
NUP50-209ENST00000432340 ZNF558Q96NG5 402 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
NUP50-209ENST00000432340 ATP6V0A4Q9HBG4 840 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 TTC41PQ6P2S7 1318 aa18.23■□□□□ 0.51
NUP50-209ENST00000432340 ATG2AQ2TAZ0 1938 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 IBSPP21815 317 aaPredicted RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 HOXA13P31271 388 aaPredicted RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 GATMP50440 423 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 ATXN1P54253 815 aaKnown RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 DMWDQ09019 674 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 APOBRQ0VD83 1088 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 NFX1Q12986 1120 aaKnown RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 GIT2Q14161 759 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 RARS2Q5T160 578 aaKnown RBP18.22■□□□□ 0.51
NUP50-209ENST00000432340 NME8Q8N427 588 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 GLG1Q92896 1179 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 JMJD4Q9H9V9 463 aa18.22■□□□□ 0.51
NUP50-209ENST00000432340 CARNS1A5YM72 827 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 SPTLC1O15269 473 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 ADRB1P08588 477 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 TCF7P36402 384 aaPredicted RBP18.21■□□□□ 0.51
NUP50-209ENST00000432340 SP4Q02446 784 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 VARS2Q5ST30 1063 aaKnown RBP18.21■□□□□ 0.51
NUP50-209ENST00000432340 NLRX1Q86UT6 975 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 GPKOWQ92917 476 aaPredicted RBP eCLIP18.21■□□□□ 0.51
NUP50-209ENST00000432340 CDHR1Q96JP9 859 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
NUP50-209ENST00000432340 SPG21Q9NZD8 308 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
NUP50-209ENST00000432340 KDM3AQ9Y4C1 1321 aa18.21■□□□□ 0.51
NUP50-209ENST00000432340 ATRXP46100 2492 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 SP9P0CG40 484 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 PDE4AP27815 886 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 KCNT2Q6UVM3 1135 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 C1orf210Q8IVY1 113 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 ABI1Q8IZP0 508 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 LRRC43Q8N309 656 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 DCLK2Q8N568 766 aa18.2■□□□□ 0.5
NUP50-209ENST00000432340 SEPT1Q8WYJ6 367 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms