RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ZNF483Q8TF39 744 aaPredicted RBP3.21□□□□□ -1.9
CDC40-204ENST00000431461 CLIP3Q96DZ5 547 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 FAM89AQ96GI7 184 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 JAM3Q9BX67 310 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 CARD11Q9BXL7 1154 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 MSL2Q9HCI7 577 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 GPR27Q9NS67 375 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 LRP2BPQ9P2M1 347 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 NUB1Q9Y5A7 615 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 SLC30A1Q9Y6M5 507 aa3.21□□□□□ -1.9
CDC40-204ENST00000431461 PDPK1O15530 556 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 CDC14BO60729 498 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 CUTAO60888 179 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 DDAH1O94760 285 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 CLSTN1O94985 981 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 PEX11BO96011 259 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 ERBB2P04626 1255 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 POLD1P28340 1107 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 ETFBP38117 255 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
CDC40-204ENST00000431461 ZNF568Q3ZCX4 644 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 LARP1BQ659C4 914 aaKnown RBP3.2□□□□□ -1.9
CDC40-204ENST00000431461 OTOP3Q7RTS5 596 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 GLCCI1Q86VQ1 547 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 FAM178BQ8IXR5 827 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 SYNPOQ8N3V7 929 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 IPO9Q96P70 1041 aaKnown RBP3.2□□□□□ -1.9
CDC40-204ENST00000431461 SLC2A4RGQ9NR83 387 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 MSRB2Q9Y3D2 182 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 MRVI1Q9Y6F6 885 aa3.2□□□□□ -1.9
CDC40-204ENST00000431461 TMEM191CA6NGB0 347 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 ZNF839A8K0R7 811 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 SUSD5O60279 629 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 ACRV1P26436 265 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 ADRA1BP35368 520 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 EPHA5P54756 1037 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 MRPS21P82921 87 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 MAP4K2Q12851 820 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 DUSP8Q13202 625 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 TUSC3Q13454 348 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 TOP3AQ13472 1001 aaPredicted RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 SERINC3Q13530 473 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 RNF151Q2KHN1 245 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 MTERF2Q49AM1 385 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 ZMAT1Q5H9K5 638 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 CD276Q5ZPR3 534 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 C6orf15Q6UXA7 325 aaPredicted RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 RSPO2Q6UXX9 243 aaPredicted RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 RBM12BQ8IXT5 1001 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 UHMK1Q8TAS1 419 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 HNRNPLLQ8WVV9 542 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 SCYL1Q96KG9 808 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 SRPK1Q96SB4 655 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 C12orf65Q9H3J6 166 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 OAZ3Q9UMX2 235 aa3.19□□□□□ -1.9
CDC40-204ENST00000431461 TMA7Q9Y2S6 64 aaKnown RBP3.19□□□□□ -1.9
CDC40-204ENST00000431461 INO80B-WBP1J3KQ70 363 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 FOXN1O15353 648 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 MSCO60682 206 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 LTFP02788 710 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 NAT1P18440 290 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 RPS19P39019 145 aaKnown RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 NFYCQ13952 458 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 HSP90AA2PQ14568 343 aaPredicted RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 HABP4Q5JVS0 413 aaKnown RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 DPP8Q6V1X1 898 aaPredicted RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 PMFBP1Q8TBY8 1022 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 MICAL1Q8TDZ2 1067 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 KCTD13Q8WZ19 329 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 DEPDC7Q96QD5 511 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 DNAJC2Q99543 621 aaKnown RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 TACO1Q9BSH4 297 aaKnown RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 INO80BQ9C086 356 aaPredicted RBP3.18□□□□□ -1.9
CDC40-204ENST00000431461 ZSWIM4Q9H7M6 989 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 TLR9Q9NR96 1032 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 TELO2Q9Y4R8 837 aa3.18□□□□□ -1.9
CDC40-204ENST00000431461 ACOT7O00154 380 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 MATN2O00339 956 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 RPS6KA4O75676 772 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 GJB6O95452 261 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 HIBADHP31937 336 aaKnown RBP3.17□□□□□ -1.9
CDC40-204ENST00000431461 COL10A1Q03692 680 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 SPIRE1Q08AE8 756 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 ZSWIM2Q8NEG5 633 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 THAP3Q8WTV1 239 aaPredicted RBP3.17□□□□□ -1.9
CDC40-204ENST00000431461 PLA2G12BQ9BX93 195 aa3.17□□□□□ -1.9
CDC40-204ENST00000431461 PPARGC1AQ9UBK2 798 aaKnown RBP3.17□□□□□ -1.9
CDC40-204ENST00000431461 ESYT3A0FGR9 886 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 PROB1E7EW31 1015 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 NKRFO15226 690 aaKnown RBP eCLIP3.16□□□□□ -1.9
CDC40-204ENST00000431461 RHOBTB3O94955 611 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 GNAT1P11488 350 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 COL6A2P12110 1019 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 KRT4P19013 534 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 GRK2P25098 689 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 MSX2P35548 267 aaPredicted RBP3.16□□□□□ -1.9
CDC40-204ENST00000431461 GRK3P35626 688 aa3.16□□□□□ -1.9
CDC40-204ENST00000431461 GRIA2P42262 883 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms