RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 MPHOSPH8Q99549 860 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 LLPHQ9BRT6 129 aaKnown RBP5.8□□□□□ -1.48
PTPN4-203ENST00000430976 MIS12Q9H081 205 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 BAIAP2L1Q9UHR4 511 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 ATP6V1HQ9UI12 483 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 TMX2Q9Y320 296 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 GAKO14976 1311 aa5.8□□□□□ -1.48
PTPN4-203ENST00000430976 PIK3R4Q99570 1358 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TMEM238LA0A1B0GVL6 79 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TTI1O43156 1089 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 EEF2P13639 858 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 VARSP26640 1264 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 IFNA8P32881 189 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CCT6AP40227 531 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 GCLCP48506 637 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 AP3M2P53677 418 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 NFKB2Q00653 900 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PPP2R2DQ66LE6 453 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SULT1C3Q6IMI6 304 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CEP85Q6P2H3 762 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 C16orf86Q6ZW13 317 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 BEND5Q7L4P6 421 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 MCF2L2Q86YR7 1114 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TMEM237Q96Q45 408 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 EYA1Q99502 592 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 APOL6Q9BWW8 343 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 KRT23Q9C075 422 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 DNAJC18Q9H819 358 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SCPEP1Q9HB40 452 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CYLDQ9NQC7 956 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PSDA5PKW4 1024 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 AKAP10O43572 662 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ATP9AO75110 1047 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 RARGP13631 454 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 FECHP22830 423 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 GNL1P36915 607 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 VCPP55072 806 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 MYO1EQ12965 1108 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 FLOT2Q14254 428 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TLR1Q15399 786 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 UGP2Q16851 508 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SETMARQ53H47 684 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 DCAF8Q5TAQ9 597 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PRPF40BQ6NWY9 871 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CYB5D1Q6P9G0 228 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC81Q6ZN84 652 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ANO5Q75V66 913 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SLFN12Q8IYM2 578 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 DTX3Q8N9I9 347 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ZKSCAN4Q969J2 545 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 COG3Q96JB2 828 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PDLIM2Q96JY6 352 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC42Q96M95 316 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CARD9Q9H257 536 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ZWILCHQ9H900 591 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 HAUS2Q9NVX0 235 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TMOD3Q9NYL9 352 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SMG6Q86US8 1419 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TONSLQ96HA7 1378 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 HTR3EA5X5Y0 456 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ZSCAN5CA6NGD5 496 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 B4DLN1 442 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 IGF2BP3O00425 579 aaKnown RBP eCLIP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SGSM2O43147 1006 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PRPF6O94906 941 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 OR5F1O95221 314 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CHRM5P08912 532 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 JAK1P23458 1154 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 PSMA3P25788 255 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SERPINB3P29508 390 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 SLC8A1P32418 973 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 TBX2Q13207 712 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CUL2Q13617 745 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ARHGAP44Q17R89 818 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 MMEL1Q495T6 779 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ARSHQ5FYA8 562 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 STXBP5Q5T5C0 1151 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 RC3H1Q5TC82 1133 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 THEMISQ8N1K5 641 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ANAPC16Q96DE5 110 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 FAM167AQ96KS9 214 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ZSCAN16Q9H4T2 348 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 NGRNQ9NPE2 291 aaKnown RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ANKEF1Q9NU02 776 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CUEDC1Q9NWM3 386 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ADAM21Q9UKJ8 722 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 ITIH6Q6UXX5 1313 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 INSRP06213 1382 aa5.79□□□□□ -1.48
PTPN4-203ENST00000430976 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CACNB4O00305 520 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 DYNC1LI2O43237 492 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 HLA-DRAP01903 254 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 TKTP29401 623 aaKnown RBP5.78□□□□□ -1.48
PTPN4-203ENST00000430976 L1CAMP32004 1257 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 PCK1P35558 622 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 KRT85P78386 507 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CYP4A11Q02928 519 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CDC16Q13042 620 aa5.78□□□□□ -1.48
PTPN4-203ENST00000430976 CCDC149Q6ZUS6 474 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms