RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 CERS4Q9HA82 394 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 NRBP2Q9NSY0 501 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 PCDHA10Q9Y5I2 948 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 TRPV2Q9Y5S1 764 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 TRANK1O15050 2925 aa10.34□□□□□ -0.75
HDAC9-211ENST00000430454 IGKV6D-21A0A0A0MT36 114 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 WDR64B1ANS9 1081 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 FAM86B1E9PN63 330 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 MAGEB2O15479 319 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 UPP2O95045 317 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 CHRNA1P02708 482 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 FAM86B2P0C5J1 330 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 STAG3L1P0CL83 205 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 GHRP10912 638 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 TMOD1P28289 359 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 SFNP31947 248 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 JAK3P52333 1124 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 HTRA4P83105 476 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-211ENST00000430454 PAK2Q13177 524 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 NTRK3Q16288 839 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 SWSAP1Q6NVH7 229 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 ABHD15Q6UXT9 468 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.33□□□□□ -0.76
HDAC9-211ENST00000430454 RUFY4Q6ZNE9 571 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 FBXO22Q8NEZ5 403 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 RDM1Q8NG50 284 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 CRYGNQ8WXF5 182 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 BBXQ8WY36 941 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-211ENST00000430454 ASB2Q96Q27 587 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 RIT2Q99578 217 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 COL25A1Q9BXS0 654 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-211ENST00000430454 NCOA5Q9HCD5 579 aaKnown RBP10.33□□□□□ -0.76
HDAC9-211ENST00000430454 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 VPS54Q9P1Q0 977 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 MTCH2Q9Y6C9 303 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 CDY2AQ9Y6F7 541 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 KAT6AQ92794 2004 aa10.33□□□□□ -0.76
HDAC9-211ENST00000430454 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 CUL9Q8IWT3 2517 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 IGLV3-22A0A075B6J6 115 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 LINC01553A4QN01 128 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 DKC1O60832 514 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 GAS7O60861 476 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 KLRC1P26715 233 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 CDC42EP1Q00587 391 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 GRB10Q13322 594 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 TOB2Q14106 344 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 LPIN1Q14693 890 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 TMEM132AQ24JP5 1023 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 MARCH8Q5T0T0 291 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 MTHFD1LQ6UB35 978 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 KRT25Q7Z3Z0 450 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 BLIDQ8IZY5 108 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 FIBCD1Q8N539 461 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 SP7Q8TDD2 431 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 MAP7D2Q96T17 732 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 PCYT2Q99447 389 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 TEKT3Q9BXF9 490 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 CELF4Q9BZC1 486 aaKnown RBP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 UPF3BQ9BZI7 483 aaKnown RBP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-211ENST00000430454 PRUNE2Q8WUY3 3088 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 KDM3AQ9Y4C1 1321 aa10.32□□□□□ -0.76
HDAC9-211ENST00000430454 CCDC194A0A1B0GVG4 234 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 LCHNA4D1U4 455 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 GPR182O15218 404 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 DHX15O43143 795 aaKnown RBP10.31□□□□□ -0.76
HDAC9-211ENST00000430454 MARCH6O60337 910 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 CCNE2O96020 404 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 RB1P06400 928 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 MGAT3Q09327 533 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 STK3Q13188 491 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 NONOQ15233 471 aaKnown RBP eCLIP10.31□□□□□ -0.76
HDAC9-211ENST00000430454 Q4G0T1 1027 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 LRCH2Q5VUJ6 765 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 MOXD1Q6UVY6 613 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 TMCO2Q7Z6W1 182 aaPredicted RBP10.31□□□□□ -0.76
HDAC9-211ENST00000430454 DAGLBQ8NCG7 672 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 HLA-CQ95604 372 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 DISC1Q9NRI5 854 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 MTUS1Q9ULD2 1270 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 LRFN2Q9ULH4 789 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 TELO2Q9Y4R8 837 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 GBF1Q92538 1859 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 STK36Q9NRP7 1315 aa10.31□□□□□ -0.76
HDAC9-211ENST00000430454 EYSQ5T1H1 3165 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 CDH23Q9H251 3354 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 CYP3A7-CYP3A51PA0A087WV96 503 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 RFXAPO00287 272 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 ENPP3O14638 875 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 NCK2O43639 380 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 PFKFB2O60825 505 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 RPS6KA5O75582 802 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 GCFC2P16383 781 aaKnown RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 CYP3A7P24462 503 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 DNM2P50570 870 aa10.3□□□□□ -0.76
HDAC9-211ENST00000430454 MKRN4PQ13434 485 aaPredicted RBP10.3□□□□□ -0.76
HDAC9-211ENST00000430454 TRIM29Q14134 588 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms