RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 PIGSQ96S52 555 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MMRN2Q9H8L6 949 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CD209Q9NNX6 404 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 SLC39A2Q9NP94 309 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 CEP72Q9P209 647 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 HDAC6Q9UBN7 1215 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 COL4A3BPQ9Y5P4 624 aa9.59□□□□□ -0.87
GABPB1-205ENST00000429662 MACROD2A1Z1Q3 448 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 GOLGA6BA6NDN3 693 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 CES2O00748 559 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 FKTNO75072 461 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 PRPF6O94906 941 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SYF2O95926 243 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SERPING1P05155 500 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 GOLGA8HP0CJ92 632 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 EPB41P11171 864 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 EPHB4P54760 987 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 TNIP1Q15025 636 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 CFAP221Q4G0U5 840 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 LRRC55Q6ZSA7 311 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SRLQ86TD4 932 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 IFT20Q8IY31 132 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 FAM76AQ8TAV0 307 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SNX29Q8TEQ0 813 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 LRRC15Q8TF66 581 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 RPGRQ92834 1020 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 CAVIN3Q969G5 261 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 KCTD12Q96CX2 325 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 RBM17Q96I25 401 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 CAPZA3Q96KX2 299 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 OSBPL9Q96SU4 736 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SELENOOQ9BVL4 669 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 FAM204AQ9H8W3 233 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 MTMR4Q9NYA4 1195 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 PODXL2Q9NZ53 605 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 ARHGAP20Q9P2F6 1191 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 BIN2Q9UBW5 565 aaPredicted RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 SAP30BPQ9UHR5 308 aaKnown RBP9.58□□□□□ -0.88
GABPB1-205ENST00000429662 GGA1Q9UJY5 639 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 NAV1Q8NEY1 1877 aa9.58□□□□□ -0.88
GABPB1-205ENST00000429662 ATP8B3O60423 1300 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 TTC28Q96AY4 2481 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 OTOFQ9HC10 1997 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 IGKV6D-41A0A0C4DH26 115 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 RCCD1A6NED2 376 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 BTNL10A8MVZ5 291 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 MARCH6O60337 910 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 SRGAP2O75044 1071 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 PPFIA4O75335 1185 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 PDHBP11177 359 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 KLK7P49862 253 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 RHBDL3P58872 404 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 DIXDC1Q155Q3 683 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 IFI16Q16666 785 aaKnown RBP9.57□□□□□ -0.88
GABPB1-205ENST00000429662 ASTE1Q2TB18 679 aaPredicted RBP9.57□□□□□ -0.88
GABPB1-205ENST00000429662 SFMBT2Q5VUG0 894 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 MOXD1Q6UVY6 613 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 RRAGAQ7L523 313 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 TEX2Q8IWB9 1127 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 EIF1ADQ8N9N8 165 aaKnown RBP9.57□□□□□ -0.88
GABPB1-205ENST00000429662 SLC44A5Q8NCS7 719 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 SPATA4Q8NEY3 305 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 BAP1Q92560 729 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 DDX12PQ92771 950 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 CUL5Q93034 780 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 RASSF4Q9H2L5 321 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 SUGCTQ9HAC7 445 aa9.57□□□□□ -0.88
GABPB1-205ENST00000429662 BZW2Q9Y6E2 419 aaKnown RBP9.57□□□□□ -0.88
GABPB1-205ENST00000429662 LRRC53A6NM62 1247 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF263O14978 683 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 SHOX2O60902 331 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 N4BP1O75113 896 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 TTLL1O95922 423 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 CLK2P49760 499 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 USP11P51784 963 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 GYS2P54840 703 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 FKBP1BP68106 108 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 GPSM2P81274 684 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 EDRF1Q3B7T1 1238 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 CCDC40Q4G0X9 1142 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 ZCWPW2Q504Y3 356 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 FAM26FQ5R3K3 315 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 ZC3H3Q8IXZ2 948 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 SP8Q8IXZ3 490 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 SLFN12Q8IYM2 578 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 C1orf131Q8NDD1 294 aaKnown RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 ZNF333Q96JL9 665 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 CCDC17Q96LX7 622 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 RUFY1Q96T51 708 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 VAT1LQ9HCJ6 419 aa9.56□□□□□ -0.88
GABPB1-205ENST00000429662 FAM207AQ9NSI2 230 aaPredicted RBP9.56□□□□□ -0.88
GABPB1-205ENST00000429662 PANK4Q9NVE7 773 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms