RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 JADE2Q9NQC1 790 aa20.97■□□□□ 0.95
UPK3BP1-201ENST00000428678 PADI3Q9ULW8 664 aa20.97■□□□□ 0.95
UPK3BP1-201ENST00000428678 SQORQ9Y6N5 450 aa20.97■□□□□ 0.95
UPK3BP1-201ENST00000428678 CCDC69A6NI79 296 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 EYA4O95677 639 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 RBM23Q86U06 439 aaKnown RBP20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 CRIPAKQ8N1N5 446 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 TRAPPC12Q8WVT3 735 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 TNPO1Q92973 898 aaKnown RBP20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 CLEC1BQ9P126 229 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 SLC9A2Q9UBY0 812 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 LRFN2Q9ULH4 789 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 PCDHA6Q9UN73 950 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 PCDHA8Q9Y5H6 950 aa20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 RBM8AQ9Y5S9 174 aaKnown RBP20.96■□□□□ 0.95
UPK3BP1-201ENST00000428678 MAFGO15525 162 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 GATMP50440 423 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 RAB11FIP4Q86YS3 637 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 CCDC82Q8N4S0 544 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 SMRP1Q8NCR6 262 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 MAP4K1Q92918 833 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 CELF4Q9BZC1 486 aaKnown RBP20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 PCDHA2Q9Y5H9 948 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 IGSF9BQ9UPX0 1349 aa20.95■□□□□ 0.94
UPK3BP1-201ENST00000428678 PLXNA4Q9HCM2 1894 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 SH2B2O14492 632 aaPredicted RBP20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 PPFIA3O75145 1194 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 MCM5P33992 734 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 PLCB4Q15147 1175 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMEM266Q2M3C6 531 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 HEATR3Q7Z4Q2 680 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMTC2Q8N394 836 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 SDF4Q9BRK5 362 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 MTA3Q9BTC8 594 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 KCNH7Q9NS40 1196 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 BARX2Q9UMQ3 279 aaPredicted RBP20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 PCDHGC5Q9Y5F6 944 aa20.94■□□□□ 0.94
UPK3BP1-201ENST00000428678 CACNA1HO95180 2353 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 CALM1P0DP23 149 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 CALM2P0DP24 149 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 CALM3P0DP25 149 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 ACTR2P61160 394 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 KRT76Q01546 638 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 COASYQ13057 564 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 SPOUT1Q5T280 376 aaKnown RBP20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMEM87BQ96K49 555 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMX1Q9H3N1 280 aa20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 USP15Q9Y4E8 981 aaPredicted RBP20.93■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMEM221A6NGB7 291 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 M0R296 226 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 GLP2RO95838 553 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 STAT5BP51692 787 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 NFX1Q12986 1120 aaKnown RBP20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 TRIM67Q6ZTA4 783 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 PLPPR4Q7Z2D5 763 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 CYP2W1Q8TAV3 490 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 MICAL1Q8TDZ2 1067 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 PBXIP1Q96AQ6 731 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 MXRA8Q9BRK3 442 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 TLE6Q9H808 572 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 GINS2Q9Y248 185 aa20.92■□□□□ 0.94
UPK3BP1-201ENST00000428678 SMIM35A0A1B0GVV1 85 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 LOC730098B7Z3J9 87 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 NFASCO94856 1347 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 SARSP49591 514 aaKnown RBP20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 MTHFD1LQ6UB35 978 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 TMTC3Q6ZXV5 915 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 NME8Q8N427 588 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 KDM3AQ9Y4C1 1321 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 PCDHB7Q9Y5E2 793 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 PCDHB12Q9Y5F1 795 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 SLC12A7Q9Y666 1083 aa20.91■□□□□ 0.94
UPK3BP1-201ENST00000428678 USP34Q70CQ2 3546 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 PER2O15055 1255 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 ARP10275 920 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 ZXDAP98168 799 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 BMP8AQ7Z5Y6 402 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 SUGP1Q8IWZ8 645 aaKnown RBP20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 PRSS33Q8NF86 280 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 PGBD1Q96JS3 809 aa20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 FNDC1Q4ZHG4 1894 aaPredicted RBP20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 ZFHX2Q9C0A1 2572 aaPredicted RBP20.9■□□□□ 0.94
UPK3BP1-201ENST00000428678 EVPLQ92817 2033 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 DENND3A2RUS2 1198 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 TBKBP1A7MCY6 615 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 MGEA5O60502 916 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 KLRC1P26715 233 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 LIFRP42702 1097 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 ITGB3BPQ13352 177 aaPredicted RBP20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 COL9A3Q14050 684 aaPredicted RBP20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 CBX2Q14781 532 aaPredicted RBP20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 IER5LQ5T953 404 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 FANCBQ8NB91 859 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 RPGRIP1Q96KN7 1286 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 PHOX2BQ99453 314 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 PHF7Q9BWX1 381 aaPredicted RBP20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 LRRC2Q9BYS8 371 aa20.89■□□□□ 0.93
UPK3BP1-201ENST00000428678 ERVK-5Q9HDB9 667 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms