RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 CDCA3Q99618 268 aaPredicted RBP9.42□□□□□ -0.9
ITSN1-216ENST00000428240 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 TMEM260Q9NX78 707 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 LRFN2Q9ULH4 789 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 PCDHB12Q9Y5F1 795 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 TRPV2Q9Y5S1 764 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 SQORQ9Y6N5 450 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 MYH6P13533 1939 aa9.42□□□□□ -0.9
ITSN1-216ENST00000428240 CACNA1HO95180 2353 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PNMA6FA0A0J9YX94 578 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 TBKBP1A7MCY6 615 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 HIDE1A8MVS5 230 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 C2CD4DB7Z1M9 353 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 MGEA5O60502 916 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 ARP10275 920 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
ITSN1-216ENST00000428240 MFAP1P55081 439 aaKnown RBP9.41□□□□□ -0.9
ITSN1-216ENST00000428240 MTMR3Q13615 1198 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PLPP4Q5VZY2 271 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PCNX4Q63HM2 1172 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 CWC27Q6UX04 472 aaKnown RBP9.41□□□□□ -0.9
ITSN1-216ENST00000428240 TRAPPC12Q8WVT3 735 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 SEPT1Q8WYJ6 367 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 GLG1Q92896 1179 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 NKD2Q969F2 451 aaPredicted RBP9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PCYT2Q99447 389 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 KRT23Q9C075 422 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 POMKQ9H5K3 350 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 SENP2Q9HC62 589 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 TYW1Q9NV66 732 aaKnown RBP9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PKD2L1Q9P0L9 805 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 SORCS3Q9UPU3 1222 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 PCDHB7Q9Y5E2 793 aa9.41□□□□□ -0.9
ITSN1-216ENST00000428240 ZFHX4Q86UP3 3567 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 FSD2A1L4K1 749 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 RRN3P2A6NIE6 340 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 MEIS2O14770 477 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 ASGR2P07307 311 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 ITGB5P18084 799 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 GRM4Q14833 912 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 IMMTQ16891 758 aaKnown RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 ASTLQ6HA08 431 aaPredicted RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 NLRX1Q86UT6 975 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 UBALD2Q8IYN6 164 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 THNSL1Q8IYQ7 743 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 COLGALT1Q8NBJ5 622 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 GIMAP8Q8ND71 665 aaPredicted RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 SMARCC2Q8TAQ2 1214 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 RASGRP4Q8TDF6 673 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 TCF25Q9BQ70 676 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 CELF4Q9BZC1 486 aaKnown RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 CWH43Q9H720 699 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 CDHR5Q9HBB8 845 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 AAASQ9NRG9 546 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 ZBTB47Q9UFB7 747 aaPredicted RBP9.4□□□□□ -0.9
ITSN1-216ENST00000428240 NR2E1Q9Y466 385 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 SPTBN4Q9H254 2564 aa9.4□□□□□ -0.9
ITSN1-216ENST00000428240 LAMA4Q16363 1823 aa9.4□□□□□ -0.91
ITSN1-216ENST00000428240 M0QZ92 97 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 WEE2P0C1S8 567 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 SRGAP2BP0DMP2 458 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 FGFR1P11362 822 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
ITSN1-216ENST00000428240 PBX3P40426 434 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 TROAPQ12815 778 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 TRAF1Q13077 416 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 PDE12Q6L8Q7 609 aaKnown RBP9.39□□□□□ -0.91
ITSN1-216ENST00000428240 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 TMEM40Q8WWA1 233 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 MRPS27Q92552 414 aaKnown RBP9.39□□□□□ -0.91
ITSN1-216ENST00000428240 GPRASP2Q96D09 838 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 ADAM2Q99965 735 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 DSCC1Q9BVC3 393 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 IL25Q9H293 177 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 CNNM2Q9H8M5 875 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 ERVK-5Q9HDB9 667 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 ENTPD7Q9NQZ7 604 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 RGS18Q9NS28 235 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 GINS2Q9Y248 185 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 NOC2LQ9Y3T9 749 aaKnown RBP9.39□□□□□ -0.91
ITSN1-216ENST00000428240 PCDHA2Q9Y5H9 948 aa9.39□□□□□ -0.91
ITSN1-216ENST00000428240 KDM3AQ9Y4C1 1321 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 SMIM35A0A1B0GVV1 85 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 MED19A0JLT2 244 aaPredicted RBP9.38□□□□□ -0.91
ITSN1-216ENST00000428240 C9IYK1 514 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 PIK3CDO00329 1044 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 PI15O43692 258 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 RPLP2P05387 115 aaKnown RBP9.38□□□□□ -0.91
ITSN1-216ENST00000428240 PDE4AP27815 886 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 KRT76Q01546 638 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 MTMR1Q13613 665 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 CWF19L1Q69YN2 538 aaKnown RBP9.38□□□□□ -0.91
ITSN1-216ENST00000428240 KANK3Q6NY19 840 aa9.38□□□□□ -0.91
ITSN1-216ENST00000428240 MTHFD1LQ6UB35 978 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms