RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 TLR3O15455 904 aaKnown RBP16.96■□□□□ 0.31
VARS2-203ENST00000428017 HBP1O60381 514 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 SLITRK3O94933 977 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 RPA1P27694 616 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 OTUD6AQ7L8S5 288 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 C4orf19Q8IY42 314 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 PPP1R13LQ8WUF5 828 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 LEO1Q8WVC0 666 aaPredicted RBP16.96■□□□□ 0.31
VARS2-203ENST00000428017 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 CLIC6Q96NY7 704 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 CSRNP2Q9H175 543 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 HDAC6Q9UBN7 1215 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 SEPT9Q9UHD8 586 aaPredicted RBP16.96■□□□□ 0.31
VARS2-203ENST00000428017 ATP11BQ9Y2G3 1177 aa16.96■□□□□ 0.31
VARS2-203ENST00000428017 KIAA0100Q14667 2235 aaKnown RBP16.96■□□□□ 0.3
VARS2-203ENST00000428017 NRCAMQ92823 1304 aa16.96■□□□□ 0.3
VARS2-203ENST00000428017 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.3
VARS2-203ENST00000428017 RRN3P2A6NIE6 340 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 DCDC2CA8MYV0 355 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
VARS2-203ENST00000428017 CUTAO60888 179 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 INSRRP14616 1297 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 MUTP22033 750 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CDC25AP30304 524 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 YWHABP31946 246 aaKnown RBP16.95■□□□□ 0.3
VARS2-203ENST00000428017 RTP1P59025 263 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 IGBP1P78318 339 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 GRIK4Q16099 956 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 C1orf53Q5VUE5 145 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CABP7Q86V35 215 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 SESTD1Q86VW0 696 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CATSPER3Q86XQ3 398 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 SLC43A3Q8NBI5 491 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CHAMP1Q96JM3 812 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 GTF2IRD1Q9UHL9 959 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 GRIN2DO15399 1336 aa16.95■□□□□ 0.3
VARS2-203ENST00000428017 CENPFP49454 3210 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 SLC26A4O43511 780 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 ZNF862O60290 1169 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 MED24O75448 989 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 GRIN1Q05586 938 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 SNX17Q15036 470 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 PTGISQ16647 500 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 LRRC26Q2I0M4 334 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 ZNF484Q5JVG2 852 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 ZNF579Q8NAF0 562 aaKnown RBP16.94■□□□□ 0.3
VARS2-203ENST00000428017 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 NT5C3AQ9H0P0 336 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
VARS2-203ENST00000428017 COL1A2P08123 1366 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 DOCK5Q9H7D0 1870 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 GOLGA6L4A6NEF3 574 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 LYPLA2O95372 231 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 SPATA31C1P0DKV0 1188 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 ATP4AP20648 1035 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 CDK7P50613 346 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 TLE2Q04725 743 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 SPECC1Q5M775 1068 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 POTEGQ6S5H5 508 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 SYMPKQ92797 1274 aaKnown RBP16.93■□□□□ 0.3
VARS2-203ENST00000428017 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 WRAP73Q9P2S5 460 aaPredicted RBP16.93■□□□□ 0.3
VARS2-203ENST00000428017 PCDHA7Q9UN72 937 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 KIAA1024Q9UPX6 916 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 DNM3Q9UQ16 869 aa16.93■□□□□ 0.3
VARS2-203ENST00000428017 XRCC6P12956 609 aaKnown RBP eCLIP16.92■□□□□ 0.3
VARS2-203ENST00000428017 MTERF2Q49AM1 385 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 XKR9Q5GH70 373 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 GDF6Q6KF10 455 aaPredicted RBP16.92■□□□□ 0.3
VARS2-203ENST00000428017 FAM126BQ8IXS8 530 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 DPF3Q92784 378 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 EPSTI1Q96J88 318 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 CEP170P1Q96L14 293 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 NIFKQ9BYG3 293 aaKnown RBP16.92■□□□□ 0.3
VARS2-203ENST00000428017 TRPV6Q9H1D0 765 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 GDPD2Q9HCC8 539 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 ANKEF1Q9NU02 776 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 TRMT13Q9NUP7 481 aaKnown RBP16.92■□□□□ 0.3
VARS2-203ENST00000428017 DDX19AQ9NUU7 478 aaKnown RBP16.92■□□□□ 0.3
VARS2-203ENST00000428017 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 TUBE1Q9UJT0 475 aa16.92■□□□□ 0.3
VARS2-203ENST00000428017 EVI5O60447 810 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 B4GALT4O60513 344 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 TBC1D8BQ0IIM8 1120 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 PLA2G4FQ68DD2 849 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 ANO5Q75V66 913 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 EXOC8Q8IYI6 725 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 TRAPPC12Q8WVT3 735 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 PLIN2Q99541 437 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 MMTAG2Q9BU76 263 aaKnown RBP16.91■□□□□ 0.3
VARS2-203ENST00000428017 CCSER1Q9C0I3 900 aa16.91■□□□□ 0.3
VARS2-203ENST00000428017 CYP26B1Q9NR63 512 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms