RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 VCPP55072 806 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 AMPD2Q01433 879 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 RRAGAQ7L523 313 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 MLKLQ8NB16 471 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ZNF653Q96CK0 615 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 MSTO1Q9BUK6 570 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 TRIM15Q9C019 465 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SCUBE2Q9NQ36 999 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 NFKBIL1Q9UBC1 381 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 NRBP1Q9UHY1 535 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 MID2Q9UJV3 735 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ZNF148Q9UQR1 794 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 NR2E3Q9Y5X4 410 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 NPHP4O75161 1426 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 AATKQ6ZMQ8 1374 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 RNF123Q5XPI4 1314 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD33BA6NCL7 494 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 hCG_1984214I3L0E3 225 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 EBAG9O00559 213 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SLC27A2O14975 620 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 GADD45BO75293 160 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 ACADMP11310 421 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 HADHAP40939 763 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 TBX4P57082 545 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ALCAMQ13740 583 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 HDXQ7Z353 690 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 RNF180Q86T96 592 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ZNF654Q8IZM8 581 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 LRRC43Q8N309 656 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 DEPDC1BQ8WUY9 529 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 PHKBQ93100 1093 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SPATA16Q9BXB7 569 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 FSD1LQ9BXM9 530 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 IP6K2Q9UHH9 426 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 COL17A1Q9UMD9 1497 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 ANP32DO95626 131 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 MAPK1P28482 360 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 PCK1P35558 622 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 EN1Q05925 392 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 AP1B1Q10567 949 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 PAK2Q13177 524 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 R3HDM1Q15032 1099 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 SPATA2LQ8IUW3 424 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 FAM186BQ8IYM0 893 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 TEX19Q8NA77 164 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 DBNDD2Q9BQY9 259 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 C2orf40Q9H1Z8 148 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 POLKQ9UBT6 870 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 NUP160Q12769 1436 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ARAP1Q96P48 1450 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 KRT87PA6NCN2 255 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 ARIH2O95376 493 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 DNAJC24Q6P3W2 148 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 GPR101Q96P66 508 aaPredicted RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 MAF1Q9H063 256 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 IRF2BPLQ9H1B7 796 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 DMGDHQ9UI17 866 aaKnown RBP6.16□□□□□ -1.42
HERC4-206ENST00000427635 FBXL5Q9UKA1 691 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 SCINQ9Y6U3 715 aa6.16□□□□□ -1.42
HERC4-206ENST00000427635 MAP3K19Q56UN5 1328 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 ECE2O60344 883 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 RNF40O75150 1001 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 GOLGA8HP0CJ92 632 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 PSMA3P25788 255 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 STX2P32856 288 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 CDC42EP1Q00587 391 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 EDC4Q6P2E9 1401 aaKnown RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 KCNV1Q6PIU1 500 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 FOXP4Q8IVH2 680 aaPredicted RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 TRERF1Q96PN7 1200 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 FAM129AQ9BZQ8 928 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 SCHIP1Q9P0W5 487 aaPredicted RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 RASGRF2O14827 1237 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 CELF2O95319 508 aaKnown RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 STAG3L1P0CL83 205 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 HSPA6P17066 643 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 MAP4P27816 1152 aaKnown RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 SSTR3P32745 418 aaPredicted RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 GRAPQ13588 217 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 ZBTB41Q5SVQ8 909 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 B4GALNT4Q76KP1 1039 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 MYO1HQ8N1T3 1032 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 GRAPLQ8TC17 118 aaPredicted RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 GSDMAQ96QA5 445 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 MYL10Q9BUA6 226 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 MRPL47Q9HD33 250 aaKnown RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 VPS18Q9P253 973 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 CFAP69A5D8W1 941 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 DCDC2CA8MYV0 355 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 GOLGA8SH3BPF8 625 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 ZNF197O14709 1029 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 NDUFB5O43674 189 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 KRT1P04264 644 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 PCCAP05165 728 aaPredicted RBP6.15□□□□□ -1.42
HERC4-206ENST00000427635 GRIK1P39086 918 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 SPOPLQ6IQ16 392 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD42Q8N9B4 389 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 KBTBD3Q8NAB2 608 aa6.15□□□□□ -1.42
HERC4-206ENST00000427635 BLZF1Q9H2G9 400 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms