RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 CHRNA5P30532 468 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
COL12A1-205ENST00000425443 PABPC4Q13310 644 aaKnown RBP eCLIP14.24□□□□□ -0.13
COL12A1-205ENST00000425443 AP3B2Q13367 1082 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 DACT2Q5SW24 774 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 PDXDC1Q6P996 788 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 MKL1Q969V6 931 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 EMILIN3Q9NT22 766 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 BMP3P12645 472 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 CALRP27797 417 aaKnown RBP14.24□□□□□ -0.13
COL12A1-205ENST00000425443 CORO7P57737 925 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 SYDE2Q5VT97 1194 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 ARMC3Q5W041 872 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 CCDC70Q6NSX1 233 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 SH2D3CQ8N5H7 860 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 ALS2CR12Q96Q35 445 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 IDI2Q9BXS1 227 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 PACSIN1Q9BY11 444 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 FOCADQ5VW36 1801 aa14.24□□□□□ -0.13
COL12A1-205ENST00000425443 MYH7BA7E2Y1 1941 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 CYP4A11Q02928 519 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 PROCA1Q8NCQ7 364 aaPredicted RBP14.23□□□□□ -0.13
COL12A1-205ENST00000425443 FAM76AQ8TAV0 307 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 IFT81Q8WYA0 676 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 MED24O75448 989 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
COL12A1-205ENST00000425443 ADAM9Q13443 819 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 NAIF1Q69YI7 327 aaPredicted RBP14.23□□□□□ -0.13
COL12A1-205ENST00000425443 FAM133AQ8N9E0 248 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 ADAMTS1Q9UHI8 967 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
COL12A1-205ENST00000425443 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 MEIS2O14770 477 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 KRT14P02533 472 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 CCT5P48643 541 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 CARSP49589 748 aaKnown RBP14.22□□□□□ -0.13
COL12A1-205ENST00000425443 TCERG1LQ5VWI1 586 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 STIM2Q9P246 746 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 ABCB11O95342 1321 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 ADAMTSL1Q8N6G6 1762 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 CETN3O15182 167 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 PPIP5K2O43314 1243 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 FOSP01100 380 aaPredicted RBP14.22□□□□□ -0.13
COL12A1-205ENST00000425443 ACTN1P12814 892 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 CYP11B2P19099 503 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
COL12A1-205ENST00000425443 KCTD16Q68DU8 428 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 CC2D2BQ6DHV5 1058 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 TBC1D5Q92609 795 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 AKT1S1Q96B36 256 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 BCAS3Q9H6U6 928 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL12A1-205ENST00000425443 LRRC37AA6NMS7 1700 aa14.22□□□□□ -0.13
COL12A1-205ENST00000425443 PJA2O43164 708 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 PRLRP16471 622 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 ZCWPW2Q504Y3 356 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 IQCEQ6IPM2 695 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 CATSPER3Q86XQ3 398 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 CCDC97Q96F63 343 aaPredicted RBP14.21□□□□□ -0.13
COL12A1-205ENST00000425443 KCNMB3Q9NPA1 279 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 PALMO75781 387 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 GNA14O95837 355 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 CFBP00751 764 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 MAGEA9P43362 315 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 SLC9C1Q4G0N8 1177 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 DCAF17Q5H9S7 520 aaPredicted RBP14.21□□□□□ -0.13
COL12A1-205ENST00000425443 MCTP2Q6DN12 878 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 TATDN1Q6P1N9 297 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 CNKSR1Q969H4 720 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 ZIM3Q96PE6 472 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 MRIQ9BWK5 157 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 NFU1Q9UMS0 254 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 ANKRD31Q8N7Z5 1873 aa14.21□□□□□ -0.13
COL12A1-205ENST00000425443 KLRC1P26715 233 aa14.21□□□□□ -0.14
COL12A1-205ENST00000425443 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.14
COL12A1-205ENST00000425443 SFMBT2Q5VUG0 894 aa14.21□□□□□ -0.14
COL12A1-205ENST00000425443 PRMT6Q96LA8 375 aaPredicted RBP14.21□□□□□ -0.14
COL12A1-205ENST00000425443 CEP63Q96MT8 703 aa14.21□□□□□ -0.14
COL12A1-205ENST00000425443 CLRN2A0PK11 232 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 SFI1A8K8P3 1242 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 TBCAO75347 108 aaKnown RBP14.2□□□□□ -0.14
COL12A1-205ENST00000425443 NR2F2P24468 414 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 PAFAH1B1P43034 410 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 GUCY2FP51841 1108 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 ITIH3Q06033 890 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 ZYXQ15942 572 aaKnown RBP14.2□□□□□ -0.14
COL12A1-205ENST00000425443 TRMT1LQ7Z2T5 733 aaKnown RBP14.2□□□□□ -0.14
COL12A1-205ENST00000425443 SIAH1Q8IUQ4 282 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 LUC7LQ9NQ29 371 aaKnown RBP14.2□□□□□ -0.14
COL12A1-205ENST00000425443 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 PLSCR1O15162 318 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 CHMP2AO43633 222 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 TCP1P17987 556 aaKnown RBP14.2□□□□□ -0.14
COL12A1-205ENST00000425443 PSMC6P62333 389 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 GNGT1P63211 74 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 HYIQ5T013 277 aa14.2□□□□□ -0.14
COL12A1-205ENST00000425443 MFSD4BQ5TF39 518 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms