RNA–Protein interactions for RNA: ENST00000425085.1

TUBAP-201, Transcript of tubulin alpha pseudogene, humanhuman

BASIC

Gene TUBAP, Length 1,352 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAP-201ENST00000425085 SUGP1Q8IWZ8 645 aaKnown RBP13.21□□□□□ -0.29
TUBAP-201ENST00000425085 CMTR1Q8N1G2 835 aaKnown RBP13.21□□□□□ -0.29
TUBAP-201ENST00000425085 IGDCC4Q8TDY8 1250 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 CDHR1Q96JP9 859 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 RPGRIP1Q96KN7 1286 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 FTHL17Q9BXU8 183 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 TRPV2Q9Y5S1 764 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 UBIAD1Q9Y5Z9 338 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 LOXHD1Q8IVV2 1947 aa13.21□□□□□ -0.29
TUBAP-201ENST00000425085 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.3
TUBAP-201ENST00000425085 RRN3P2A6NIE6 340 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PER2O15055 1255 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 VCPP55072 806 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 SART3Q15020 963 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 ZNF654Q8IZM8 581 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 FBXL6Q8N531 539 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 NCOA7Q8NI08 942 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 JPH1Q9HDC5 661 aaPredicted RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 FAM86C1Q9NVL1 165 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 HCSTQ9UBK5 93 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 SEC63Q9UGP8 760 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 TRPC6Q9Y210 931 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 SQORQ9Y6N5 450 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 RIF1Q5UIP0 2472 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 hCG_1642624A0A1W2PR95 340 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 MGEA5O60502 916 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 DDAH1O94760 285 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 STAG3L1P0CL83 205 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PLCB4Q15147 1175 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 MB21D2Q8IYB1 491 aaPredicted RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 SRBD1Q8N5C6 995 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 SUSD6Q92537 303 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 CELF4Q9BZC1 486 aaKnown RBP13.2□□□□□ -0.3
TUBAP-201ENST00000425085 TLE6Q9H808 572 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 JADE2Q9NQC1 790 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 PCDHA2Q9Y5H9 948 aa13.2□□□□□ -0.3
TUBAP-201ENST00000425085 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 M0QZ92 97 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
TUBAP-201ENST00000425085 RXRAP19793 462 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 ERVFC1P60507 584 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 SIGLEC14Q08ET2 396 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 COL9A3Q14050 684 aaPredicted RBP13.19□□□□□ -0.3
TUBAP-201ENST00000425085 PKN1Q16512 942 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 CYP2W1Q8TAV3 490 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 MAP3K14Q99558 947 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 SLC9A2Q9UBY0 812 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 LRFN2Q9ULH4 789 aa13.19□□□□□ -0.3
TUBAP-201ENST00000425085 ST18O60284 1047 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 FGF18O76093 207 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 PDE4AP27815 886 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 SMARCA1P28370 1054 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 KIF5BP33176 963 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 SARSP49591 514 aaKnown RBP13.18□□□□□ -0.3
TUBAP-201ENST00000425085 ACTR2P61160 394 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 KRT76Q01546 638 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
TUBAP-201ENST00000425085 AAMPQ13685 434 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 FAM102BQ5T8I3 360 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 TMEM40Q8WWA1 233 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 PRRX2Q99811 253 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 AZI2Q9H6S1 392 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 CDHR5Q9HBB8 845 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 KCNH7Q9NS40 1196 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 PCDHA6Q9UN73 950 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 GINS2Q9Y248 185 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 PCDHA8Q9Y5H6 950 aa13.18□□□□□ -0.3
TUBAP-201ENST00000425085 FNDC1Q4ZHG4 1894 aaPredicted RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 KDM3AQ9Y4C1 1321 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 WDR87Q6ZQQ6 2873 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 SPDYE3A6NKU9 549 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 MAFGO15525 162 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 ATF7P17544 494 aaPredicted RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 SP100P23497 879 aaPredicted RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 CHMLP26374 656 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 UBE3AQ05086 875 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 APOBRQ0VD83 1088 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 DUSP6Q16828 381 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 TTC22Q5TAA0 569 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 MTHFD1LQ6UB35 978 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 RAB11FIP4Q86YS3 637 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 LZTS2Q9BRK4 669 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 ERVK-5Q9HDB9 667 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 CDH22Q9UJ99 828 aa13.17□□□□□ -0.3
TUBAP-201ENST00000425085 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
TUBAP-201ENST00000425085 PCDHB7Q9Y5E2 793 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms