RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 CRIPAKQ8N1N5 446 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 MYL10Q9BUA6 226 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 CLEC1BQ9P126 229 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 PADI3Q9ULW8 664 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 UBIAD1Q9Y5Z9 338 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
PUDP-203ENST00000424830 IGSF9BQ9UPX0 1349 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 TTC22Q5TAA0 569 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 NFXL1Q6ZNB6 911 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 RBM23Q86U06 439 aaKnown RBP18.48■□□□□ 0.55
PUDP-203ENST00000424830 RTN4RL1Q86UN2 441 aaPredicted RBP18.48■□□□□ 0.55
PUDP-203ENST00000424830 MB21D2Q8IYB1 491 aaPredicted RBP18.48■□□□□ 0.55
PUDP-203ENST00000424830 ZBTB10Q96DT7 871 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 LY9Q9HBG7 655 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 JADE2Q9NQC1 790 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 BARX2Q9UMQ3 279 aaPredicted RBP18.48■□□□□ 0.55
PUDP-203ENST00000424830 PCDHA2Q9Y5H9 948 aa18.48■□□□□ 0.55
PUDP-203ENST00000424830 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 LOC730098B7Z3J9 87 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
PUDP-203ENST00000424830 ZXDAP98168 799 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 MICAL1Q8TDZ2 1067 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 CELF4Q9BZC1 486 aaKnown RBP18.47■□□□□ 0.55
PUDP-203ENST00000424830 TLE6Q9H808 572 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 AAASQ9NRG9 546 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 RNF216Q9NWF9 866 aaPredicted RBP18.47■□□□□ 0.55
PUDP-203ENST00000424830 SLC9A2Q9UBY0 812 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 USP15Q9Y4E8 981 aaPredicted RBP18.47■□□□□ 0.55
PUDP-203ENST00000424830 PCDHB12Q9Y5F1 795 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 PLXNA4Q9HCM2 1894 aa18.47■□□□□ 0.55
PUDP-203ENST00000424830 CCDC69A6NI79 296 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 PLEKHA8P1O95397 391 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 IBSPP21815 317 aaPredicted RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 IRX6P78412 446 aaPredicted RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 KRT76Q01546 638 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 UBE3AQ05086 875 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 CBX2Q14781 532 aaPredicted RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 UBE2SQ16763 222 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 SPOUT1Q5T280 376 aaKnown RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 FAM43BQ6ZT52 329 aaPredicted RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 NME8Q8N427 588 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 SRBD1Q8N5C6 995 aaKnown RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 PRSS33Q8NF86 280 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 PCYT2Q99447 389 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 MTA3Q9BTC8 594 aa18.46■□□□□ 0.55
PUDP-203ENST00000424830 PHF7Q9BWX1 381 aaPredicted RBP18.46■□□□□ 0.55
PUDP-203ENST00000424830 KDM3AQ9Y4C1 1321 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 PPFIA3O75145 1194 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 GLP2RO95838 553 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 CALM1P0DP23 149 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 CALM2P0DP24 149 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 CALM3P0DP25 149 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 CHMLP26374 656 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 SARSP49591 514 aaKnown RBP18.45■□□□□ 0.54
PUDP-203ENST00000424830 PLCB4Q15147 1175 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 PLPPR4Q7Z2D5 763 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
PUDP-203ENST00000424830 TMTC2Q8N394 836 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 TRAPPC12Q8WVT3 735 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 TLR9Q9NR96 1032 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 PCDHA6Q9UN73 950 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 PCDHB7Q9Y5E2 793 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 PCDHA8Q9Y5H6 950 aa18.45■□□□□ 0.54
PUDP-203ENST00000424830 SMIM35A0A1B0GVV1 85 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 PRC1O43663 620 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 SRGAP2BP0DMP2 458 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 GATMP50440 423 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 STAT5BP51692 787 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 NFX1Q12986 1120 aaKnown RBP18.44■□□□□ 0.54
PUDP-203ENST00000424830 IER5LQ5T953 404 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 FBXL6Q8N531 539 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 RPGRIP1Q96KN7 1286 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 CDCA3Q99618 268 aaPredicted RBP18.44■□□□□ 0.54
PUDP-203ENST00000424830 KCNH7Q9NS40 1196 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 GINS2Q9Y248 185 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 PCDHGC5Q9Y5F6 944 aa18.44■□□□□ 0.54
PUDP-203ENST00000424830 FNDC1Q4ZHG4 1894 aaPredicted RBP18.43■□□□□ 0.54
PUDP-203ENST00000424830 DENND3A2RUS2 1198 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 SGSM2O43147 1006 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 ATF7P17544 494 aaPredicted RBP18.43■□□□□ 0.54
PUDP-203ENST00000424830 MCM5P33992 734 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 SLC26A2P50443 739 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 ACTR2P61160 394 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 SIGLEC14Q08ET2 396 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 TMEM266Q2M3C6 531 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 ODR4Q5SWX8 454 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 MTHFD1LQ6UB35 978 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 HEATR3Q7Z4Q2 680 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 TMEM87BQ96K49 555 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 NEK1Q96PY6 1258 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 PHOX2BQ99453 314 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 TMX1Q9H3N1 280 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 NFASCO94856 1347 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
PUDP-203ENST00000424830 TBKBP1A7MCY6 615 aa18.42■□□□□ 0.54
PUDP-203ENST00000424830 SH2B2O14492 632 aaPredicted RBP18.42■□□□□ 0.54
PUDP-203ENST00000424830 PER2O15055 1255 aa18.42■□□□□ 0.54
PUDP-203ENST00000424830 RPS6KA5O75582 802 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms