RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 IGBP1P78318 339 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 MRPS6P82932 125 aaKnown RBP14.8□□□□□ -0.04
VRK3-203ENST00000424804 CEP55Q53EZ4 464 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 PPP1R18Q6NYC8 613 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 ABHD15Q6UXT9 468 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 TSHZ1Q6ZSZ6 1077 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 TEX2Q8IWB9 1127 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 BANK1Q8NDB2 785 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 C1QTNF1Q9BXJ1 281 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 ANO3Q9BYT9 981 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 UPF3BQ9BZI7 483 aaKnown RBP14.8□□□□□ -0.04
VRK3-203ENST00000424804 BARHL2Q9NY43 387 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 SQORQ9Y6N5 450 aa14.8□□□□□ -0.04
VRK3-203ENST00000424804 IGLV3-22A0A075B6J6 115 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 SMCO2A6NFE2 343 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 ZBTB42B2RXF5 422 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 FAM86B1E9PN63 330 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 PI4K2BG5E9Z4 385 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 FOSP01100 380 aaPredicted RBP14.79□□□□□ -0.04
VRK3-203ENST00000424804 FAM86B2P0C5J1 330 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 ADD1P35611 737 aaKnown RBP14.79□□□□□ -0.04
VRK3-203ENST00000424804 STAT5BP51692 787 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 NAPAP54920 295 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 PKN1Q16512 942 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 CTC1Q2NKJ3 1217 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 FIBCD1Q8N539 461 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 TMX1Q9H3N1 280 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
VRK3-203ENST00000424804 ADGRA3Q8IWK6 1321 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 KDM3AQ9Y4C1 1321 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 EPB41L2O43491 1005 aaKnown RBP14.78□□□□□ -0.04
VRK3-203ENST00000424804 RB1P06400 928 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 DNAJB1P25685 340 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 ADCY7P51828 1080 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 TMEM62Q0P6H9 643 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 PTPROQ16827 1216 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 MTHFD1LQ6UB35 978 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 RUFY3Q7L099 469 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 NIPA1Q7RTP0 329 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 RSPH3Q86UC2 560 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 PABPC5Q96DU9 382 aaKnown RBP14.78□□□□□ -0.04
VRK3-203ENST00000424804 LARP6Q9BRS8 491 aaKnown RBP14.78□□□□□ -0.04
VRK3-203ENST00000424804 FAM49AQ9H0Q0 323 aaPredicted RBP14.78□□□□□ -0.04
VRK3-203ENST00000424804 CDHR5Q9HBB8 845 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 PADI3Q9ULW8 664 aa14.78□□□□□ -0.04
VRK3-203ENST00000424804 IGSF9BQ9UPX0 1349 aa14.77□□□□□ -0.04
VRK3-203ENST00000424804 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 H3BQ06 376 aaPredicted RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 GPR37L1O60883 481 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 PPFIA3O75145 1194 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 CYP3A4P08684 503 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 CTNNB1P35222 781 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 RCAN1P53805 252 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 CCT2P78371 535 aaKnown RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 DLX2Q07687 328 aaPredicted RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 HYAL1Q12794 435 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 PFKFB3Q16875 520 aaPredicted RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 TIGD5Q53EQ6 642 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 PTCRAQ6ISU1 281 aaPredicted RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 CCDC60Q8IWA6 550 aaPredicted RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 CELF4Q9BZC1 486 aaKnown RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 NSUN3Q9H649 340 aaKnown RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 ZSWIM6Q9HCJ5 1215 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 TRPV2Q9Y5S1 764 aa14.77□□□□□ -0.05
VRK3-203ENST00000424804 MRPL42Q9Y6G3 142 aaKnown RBP14.77□□□□□ -0.05
VRK3-203ENST00000424804 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
VRK3-203ENST00000424804 FNDC1Q4ZHG4 1894 aaPredicted RBP14.76□□□□□ -0.05
VRK3-203ENST00000424804 NID2Q14112 1375 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 TRIOO75962 3097 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 hCG_1984214I3L0E3 225 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 MGEA5O60502 916 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 KLRC1P26715 233 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 GTF2F1P35269 517 aaKnown RBP eCLIP14.76□□□□□ -0.05
VRK3-203ENST00000424804 STK3Q13188 491 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 AP3B2Q13367 1082 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 NTRK3Q16288 839 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 IER5Q5VY09 327 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 KIAA0319LQ8IZA0 1049 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 GJD3Q8N144 294 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 ZNF713Q8N859 430 aaPredicted RBP14.76□□□□□ -0.05
VRK3-203ENST00000424804 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 SDF4Q9BRK5 362 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 PDRG1Q9NUG6 133 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 PLAGL2Q9UPG8 496 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
VRK3-203ENST00000424804 CCDC196A0A1B0GTZ2 297 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 ESYT2A0FGR8 921 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 C19orf67A6NJJ6 358 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 SEC24BO95487 1268 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 GATMP50440 423 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 NME8Q8N427 588 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 FBXL16Q8N461 479 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 SPPL3Q8TCT6 385 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 UIMC1Q96RL1 719 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 ZMYND12Q9H0C1 365 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 LMAN2LQ9H0V9 348 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 AZI2Q9H6S1 392 aa14.75□□□□□ -0.05
VRK3-203ENST00000424804 NCOA5Q9HCD5 579 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms