RNA–Protein interactions for RNA: ENST00000424585.1

NEB-208, Transcript of nebulin, human

TSL 3

Gene NEB, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEB-208	ENST00000424585	TRBV23-1	A0A0A0MS06	115 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	FAM47E-STBD1	D6RA91	191 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	PLSCR1	O15162	318 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	NARS	O43776	548 aa	Known RBP	4.86	□□□□□ -1.63
NEB-208	ENST00000424585	ADCY3	O60266	1144 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	SOD2	P04179	222 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	FAM153B	P0C7A2	387 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	ACO1	P21399	889 aa	Known RBP	4.86	□□□□□ -1.63
NEB-208	ENST00000424585	MCM7	P33993	719 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	ETV4	P43268	484 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	PTH1R	Q03431	593 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	DPT	Q07507	201 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	KRTAP1-1	Q07627	177 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	DBP	Q10586	325 aa	Predicted RBP	4.86	□□□□□ -1.63
NEB-208	ENST00000424585	SMN1	Q16637	294 aa	Known RBP	4.86	□□□□□ -1.63
NEB-208	ENST00000424585	FAM209A	Q5JX71	171 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	FOXB2	Q5VYV0	432 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	MAMDC4	Q6UXC1	1216 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	DPH6	Q7L8W6	267 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	4.86	□□□□□ -1.63
NEB-208	ENST00000424585	EXTL1	Q92935	676 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	DNAJC7	Q99615	494 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	TRAF6	Q9Y4K3	522 aa		4.86	□□□□□ -1.63
NEB-208	ENST00000424585	RPS19	P39019	145 aa	Known RBP	4.85	□□□□□ -1.63
NEB-208	ENST00000424585	DUSP8	Q13202	625 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	NFYC	Q13952	458 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	RNF151	Q2KHN1	245 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	CXXC5	Q7LFL8	322 aa	Known RBP	4.85	□□□□□ -1.63
NEB-208	ENST00000424585	SCUBE1	Q8IWY4	988 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	NLGN4X	Q8N0W4	816 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	CHFR	Q96EP1	664 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	CSRNP2	Q9H175	543 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	C11orf21	Q9P2W6	132 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	FBXO10	Q9UK96	956 aa		4.85	□□□□□ -1.63
NEB-208	ENST00000424585	ASXL2	Q76L83	1435 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	ESYT3	A0FGR9	886 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	WNT9A	O14904	365 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	INHBE	P58166	350 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	LSM12	Q3MHD2	195 aa	Known RBP	4.84	□□□□□ -1.63
NEB-208	ENST00000424585	IGFL4	Q6B9Z1	124 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	C1orf210	Q8IVY1	113 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	SH3RF2	Q8TEC5	729 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	EXOC2	Q96KP1	924 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	DRC1	Q96MC2	740 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	ALG1	Q9BT22	464 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	ZDHHC5	Q9C0B5	715 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	SLC39A2	Q9NP94	309 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	NR2E1	Q9Y466	385 aa		4.84	□□□□□ -1.63
NEB-208	ENST00000424585	MATN2	O00339	956 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	CDC14B	O60729	498 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	ACRV1	P26436	265 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	SUMO1	P63165	101 aa	Known RBP	4.83	□□□□□ -1.64
NEB-208	ENST00000424585	BMS1	Q14692	1282 aa	Known RBP	4.83	□□□□□ -1.64
NEB-208	ENST00000424585	LRP10	Q7Z4F1	713 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	MKL1	Q969V6	931 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	CEP89	Q96ST8	783 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	DPYSL5	Q9BPU6	564 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	DHRS4	Q9BTZ2	278 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	TRIM8	Q9BZR9	551 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	OSBPL2	Q9H1P3	480 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	IPPK	Q9H8X2	491 aa		4.83	□□□□□ -1.64
NEB-208	ENST00000424585	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.83	□□□□□ -1.64
NEB-208	ENST00000424585	TCRBV5S4A2T	A0A5A2	114 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	ARHGAP6	O43182	974 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	PTPN1	P18031	435 aa	Known RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	GJA4	P35212	333 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	INHBC	P55103	352 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	STIL	Q15468	1287 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	BTBD8	Q5XKL5	378 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	MTDH	Q86UE4	582 aa	Known RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	IL17D	Q8TAD2	202 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	CACTIN	Q8WUQ7	758 aa	Known RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	PTPRN2	Q92932	1015 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	OR14A2	Q96R54	314 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	PLA2G12B	Q9BX93	195 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	CD244	Q9BZW8	370 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	ARHGAP28	Q9P2N2	729 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	PUF60	Q9UHX1	559 aa	Known RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	SRPK3	Q9UPE1	567 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	CDK11A	Q9UQ88	783 aa	Predicted RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	MRPS23	Q9Y3D9	190 aa	Known RBP	4.82	□□□□□ -1.64
NEB-208	ENST00000424585	PCDHA8	Q9Y5H6	950 aa		4.82	□□□□□ -1.64
NEB-208	ENST00000424585	AQP7	O14520	342 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	EIF4H	Q15056	248 aa	Known RBP	4.81	□□□□□ -1.64
NEB-208	ENST00000424585	GPR19	Q15760	415 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	WDR72	Q3MJ13	1102 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	WNK4	Q96J92	1243 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	IKZF4	Q9H2S9	585 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	NELFA	Q9H3P2	528 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	ZSWIM4	Q9H7M6	989 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	GALNT8	Q9NY28	637 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	PCDHA9	Q9Y5H5	950 aa		4.81	□□□□□ -1.64
NEB-208	ENST00000424585	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.8	□□□□□ -1.64
NEB-208	ENST00000424585	PMS2P1	A4D2B8	440 aa		4.8	□□□□□ -1.64
NEB-208	ENST00000424585	FAM90A27P	A6NNH2	459 aa		4.8	□□□□□ -1.64
NEB-208	ENST00000424585	HMGCR	P04035	888 aa		4.8	□□□□□ -1.64
NEB-208	ENST00000424585	C6orf222	P0C671	652 aa	Predicted RBP	4.8	□□□□□ -1.64
NEB-208	ENST00000424585	SRGAP2C	P0DJJ0	459 aa		4.8	□□□□□ -1.64
NEB-208	ENST00000424585	PTGS1	P23219	599 aa		4.8	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms