RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 GRID2IPA4D2P6 1211 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 LMNB1P20700 586 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 FLT3P36888 993 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 TNIP1Q15025 636 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 NAB2Q15742 525 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 SLC9C1Q4G0N8 1177 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 MEI1Q5TIA1 1274 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 SFMBT2Q5VUG0 894 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 CCDC91Q7Z6B0 441 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 PIGSQ96S52 555 aa15.72■□□□□ 0.11
MSH5-206ENST00000423982 BCCIPQ9P287 314 aaKnown RBP eCLIP15.72■□□□□ 0.11
MSH5-206ENST00000423982 MYH4Q9Y623 1939 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 TRAF5O00463 557 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 ECHS1P30084 290 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 CDK8P49336 464 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 SF3A3Q12874 501 aaKnown RBP eCLIP15.71■□□□□ 0.112e-6■■■□□ 19.1
MSH5-206ENST00000423982 UAP1Q16222 522 aaPredicted RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 CDC37Q16543 378 aaPredicted RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 QPCTQ16769 361 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 GUF1Q8N442 669 aaKnown RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 RNF10Q8N5U6 811 aaKnown RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 VPS33BQ9H267 617 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 MYOZ2Q9NPC6 264 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 NAV1Q8NEY1 1877 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 CDK5RAP2Q96SN8 1893 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 SSU72P8A0A1W2PR75 194 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 DCDC2CA8MYV0 355 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 FZD9O00144 591 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 KCNK3O14649 394 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 EDIL3O43854 480 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 HSD17B3P37058 310 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 KRT25Q7Z3Z0 450 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 CCDC13Q8IYE1 715 aa15.71■□□□□ 0.11
MSH5-206ENST00000423982 ZNF444Q8N0Y2 327 aaPredicted RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.11
MSH5-206ENST00000423982 WNT10BO00744 389 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 DDNO94850 711 aaPredicted RBP15.7■□□□□ 0.1
MSH5-206ENST00000423982 MAP2K2P36507 400 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 GSCP56915 257 aaPredicted RBP15.7■□□□□ 0.1
MSH5-206ENST00000423982 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 USP38Q8NB14 1042 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 AGBL3Q8NEM8 1001 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 CDK5RAP3Q96JB5 506 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 LTBP3Q9NS15 1303 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 RBAK-RBAKDNI3L0D1 243 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 ATP2C2O75185 946 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
MSH5-206ENST00000423982 ACTN3Q08043 901 aaPredicted RBP15.7■□□□□ 0.1
MSH5-206ENST00000423982 CALCRLQ16602 461 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 MREGQ8N565 214 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 TMEM39BQ9GZU3 492 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 CXorf56Q9H5V9 222 aa15.7■□□□□ 0.1
MSH5-206ENST00000423982 MPHOSPH10O00566 681 aaKnown RBP15.69■□□□□ 0.1
MSH5-206ENST00000423982 SERPING1P05155 500 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 ACTN1P12814 892 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 GNAQP50148 359 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 SEMA3FQ13275 785 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 C9orf131Q5VYM1 1079 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 COA7Q96BR5 231 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 CYFIP2Q96F07 1278 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 DDX47Q9H0S4 455 aaKnown RBP15.69■□□□□ 0.1
MSH5-206ENST00000423982 TMBIM4Q9HC24 238 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 TMOD2Q9NZR1 351 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 ZNF70Q9UC06 446 aaPredicted RBP15.69■□□□□ 0.1
MSH5-206ENST00000423982 CNOT8Q9UFF9 292 aaKnown RBP15.69■□□□□ 0.1
MSH5-206ENST00000423982 NPHP3-ACAD11A0A0J9YXS1 232 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 FAM107AO95990 144 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 RASA1P20936 1047 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 PPP1R2P41236 205 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 COBLL1Q53SF7 1204 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 CD302Q8IX05 232 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 IQCDQ96DY2 449 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 MTMR9Q96QG7 549 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 CEP72Q9P209 647 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 SERPINB13Q9UIV8 391 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 PCDHGC5Q9Y5F6 944 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 COL4A3BPQ9Y5P4 624 aa15.69■□□□□ 0.1
MSH5-206ENST00000423982 LRRC63Q05C16 580 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 SLC18A3Q16572 532 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 RAD54LQ92698 747 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 CSRNP1Q96S65 589 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 TAF1DQ9H5J8 278 aaPredicted RBP15.68■□□□□ 0.1
MSH5-206ENST00000423982 VCPKMTQ9H867 229 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 C6orf50Q9HD87 102 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 TSKSQ9UJT2 592 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 H0YGN5 161 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 CEP104O60308 925 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 ITGA4P13612 1032 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 HSPA9P38646 679 aaKnown RBP15.68■□□□□ 0.1
MSH5-206ENST00000423982 ZNF844Q08AG5 666 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 KLHL30Q0D2K2 578 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 PRAMEF18Q5VWM3 479 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
MSH5-206ENST00000423982 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
MSH5-206ENST00000423982 WHAMMQ8TF30 809 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms