RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TARBP2Q15633 366 aaKnown RBP20.76■□□□□ 0.91
HDAC6-205ENST00000423941 ZNF484Q5JVG2 852 aa20.76■□□□□ 0.91
HDAC6-205ENST00000423941 TRAF7Q6Q0C0 670 aa20.76■□□□□ 0.91
HDAC6-205ENST00000423941 NIFKQ9BYG3 293 aaKnown RBP20.76■□□□□ 0.91
HDAC6-205ENST00000423941 NOD1Q9Y239 953 aa20.76■□□□□ 0.91
HDAC6-205ENST00000423941 SLITRK3O94933 977 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 CKBP12277 381 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 QARSP47897 775 aaKnown RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 FXR2P51116 673 aaKnown RBP eCLIP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 PSMC5P62195 406 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 ATP2C1P98194 919 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 MDM2Q00987 491 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 PDIA5Q14554 519 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 FERMT3Q86UX7 667 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 C4orf19Q8IY42 314 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 FAM167AQ96KS9 214 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 CEP89Q96ST8 783 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 LBHD1Q9BQE6 289 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 PPP1R12CQ9BZL4 782 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 ZSCAN16Q9H4T2 348 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 WRAP73Q9P2S5 460 aaPredicted RBP20.75■□□□□ 0.91
HDAC6-205ENST00000423941 TRPC6Q9Y210 931 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 EVPLQ92817 2033 aa20.75■□□□□ 0.91
HDAC6-205ENST00000423941 CAND2O75155 1236 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 LYPLA2O95372 231 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 OATP04181 439 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
HDAC6-205ENST00000423941 IQCF3P0C7M6 154 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 PRKCEQ02156 737 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 SCN5AQ14524 2016 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 GPNMBQ14956 572 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 IL17AQ16552 155 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 XKR3Q5GH77 459 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 TAF2Q6P1X5 1199 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 EIF2AK1Q9BQI3 630 aaKnown RBP20.74■□□□□ 0.91
HDAC6-205ENST00000423941 NRBP2Q9NSY0 501 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 RGL1Q9NZL6 768 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 TUBE1Q9UJT0 475 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 PCDHA2Q9Y5H9 948 aa20.74■□□□□ 0.91
HDAC6-205ENST00000423941 MYH15Q9Y2K3 1946 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 KLRC1P26715 233 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 EPHB4P54760 987 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 FAM26DQ5JW98 314 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 NCAPH2Q6IBW4 605 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 MTHFD1LQ6UB35 978 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 TMEM199Q8N511 208 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 IGSF22Q8N9C0 903 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 BANK1Q8NDB2 785 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 NEK9Q8TD19 979 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 TRAPPC12Q8WVT3 735 aa20.73■□□□□ 0.91
HDAC6-205ENST00000423941 RANBP2P49792 3224 aaKnown RBP20.73■□□□□ 0.91
HDAC6-205ENST00000423941 SMIM35A0A1B0GVV1 85 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 POTEMA6NI47 508 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 DKC1O60832 514 aaKnown RBP eCLIP20.72■□□□□ 0.91
HDAC6-205ENST00000423941 PARNO95453 639 aaKnown RBP20.72■□□□□ 0.91
HDAC6-205ENST00000423941 SPATA31C1P0DKV0 1188 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 CSF2RAP15509 400 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 SELPP16109 830 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 TECP42680 631 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 FPGSQ05932 587 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 ZNF618Q5T7W0 954 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 ARL6IP4Q66PJ3 421 aaKnown RBP20.72■□□□□ 0.91
HDAC6-205ENST00000423941 RUFY4Q6ZNE9 571 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 ANO5Q75V66 913 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 CKAP2LQ8IYA6 745 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 DYDC2Q96IM9 177 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 CEP131Q9UPN4 1083 aa20.72■□□□□ 0.91
HDAC6-205ENST00000423941 COLQQ9Y215 455 aaPredicted RBP20.72■□□□□ 0.91
HDAC6-205ENST00000423941 TET1Q8NFU7 2136 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 A0A1W2PPC1 479 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 C22orf31O95567 290 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 RPLP2P05387 115 aaKnown RBP20.71■□□□□ 0.91
HDAC6-205ENST00000423941 RFC2P35250 354 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 CCL23P55773 120 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 PPIGQ13427 754 aaKnown RBP eCLIP20.71■□□□□ 0.911e-7■■■□□ 16.5
HDAC6-205ENST00000423941 BECN1Q14457 450 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 CHRDL2Q6WN34 429 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 LINC01465Q8N7H1 131 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 RETREG2Q8NC44 543 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 POLR3CQ9BUI4 534 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-205ENST00000423941 ZSWIM4Q9H7M6 989 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 MORC2Q9Y6X9 1032 aaPredicted RBP20.71■□□□□ 0.91
HDAC6-205ENST00000423941 SIP14410 1827 aa20.71■□□□□ 0.91
HDAC6-205ENST00000423941 ARID2Q68CP9 1835 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 BMP15O95972 392 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 ZSCAN22P10073 491 aaPredicted RBP20.7■□□□□ 0.9
HDAC6-205ENST00000423941 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.9
HDAC6-205ENST00000423941 MUTP22033 750 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 IGBP1P78318 339 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 PTPAQ15257 358 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 LRRC8DQ7L1W4 858 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 SPRYD3Q8NCJ5 442 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 ZBTB10Q96DT7 871 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 SCLYQ96I15 445 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 LXNQ9BS40 222 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 TUFT1Q9NNX1 390 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 IL23AQ9NPF7 189 aa20.7■□□□□ 0.9
HDAC6-205ENST00000423941 IGKV6-21A0A0C4DH24 114 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms