RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 GPR182O15218 404 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 RPS6KA5O75582 802 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 NSFP46459 744 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 KLHL30Q0D2K2 578 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 PRR12Q9ULL5 1215 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 FAM50BQ9Y247 325 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 BTAF1O14981 1849 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 MAP7D3Q8IWC1 876 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 HPCAL4Q9UM19 191 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 MEIS1O00470 390 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 VIL1P09327 827 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 SMARCA1P28370 1054 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 ALDH7A1P49419 539 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 CTTNQ14247 550 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 EFCAB13Q8IY85 973 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 PIN4Q9Y237 131 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 FAM205AQ6ZU69 1335 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 PSMC4P43686 418 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 SCYL2Q6P3W7 929 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 TMEM39AQ9NV64 488 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 ATP11BQ9Y2G3 1177 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 GAS2O43903 313 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 PADI6Q6TGC4 694 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 NCAPGQ9BPX3 1015 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 SLC38A10Q9HBR0 1119 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 RGPD1P0DJD0 1748 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 PDS5AQ29RF7 1337 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 ATRNO75882 1429 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 PEX3P56589 373 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 OSTNP61366 133 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 ZNF560Q96MR9 790 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 SRRTQ9BXP5 876 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 BZW2Q9Y6E2 419 aaKnown RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 KIAA0754O94854 1291 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 DHTKD1Q96HY7 919 aaPredicted RBP9.12□□□□□ -0.95
CHD7-201ENST00000423902 SPZ1Q9BXG8 430 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 IFNKQ9P0W0 207 aa9.12□□□□□ -0.95
CHD7-201ENST00000423902 ICAM1P05362 532 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 NBPF12Q5TAG4 269 aaPredicted RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 FAM149B1Q96BN6 582 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 LY9Q9HBG7 655 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 SUCLA2Q9P2R7 463 aaPredicted RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 THAP12O43422 761 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 MORC3Q14149 939 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 TAOK1Q7L7X3 1001 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 SLC39A2Q9NP94 309 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 NR2F2P24468 414 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 DDR1Q08345 913 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 TRMT1Q9NXH9 659 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 PRRG1O14668 218 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 THPOP40225 353 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 MTG1Q9BT17 334 aaPredicted RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 NXF1Q9UBU9 619 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 UBR2Q8IWV8 1755 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 H0YHG0 523 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 EVI5O60447 810 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 FAM186BQ8IYM0 893 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 AFAP1L2Q8N4X5 818 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 CACYBPQ9HB71 228 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 TUFT1Q9NNX1 390 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 EIF3CLB5ME19 914 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 RFC5P40937 340 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 ITIH3Q06033 890 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 EIF3CQ99613 913 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 PPANQ9NQ55 473 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 RAB20Q9NX57 234 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 NEDD4P46934 1319 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 ZC3H4Q9UPT8 1303 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 NMT2O60551 498 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 PLEKHA8P1O95397 391 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 FKBP3Q00688 224 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 HEXIM2Q96MH2 286 aaKnown RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 TSPYL1Q9H0U9 437 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 PCDHB12Q9Y5F1 795 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 UPP2O95045 317 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 GPC3P51654 580 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 NOTUMQ6P988 496 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 USP17L6PQ6QN14 398 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 SHCBP1Q8NEM2 672 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 PGBD1Q96JS3 809 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 PDIA6Q15084 440 aa9.11□□□□□ -0.95
CHD7-201ENST00000423902 POLR3FQ9H1D9 316 aaPredicted RBP9.11□□□□□ -0.95
CHD7-201ENST00000423902 ZNF667Q5HYK9 610 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 CASC4Q6P4E1 433 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 RSAD2Q8WXG1 361 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 ADM5C9JUS6 153 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 CEP112Q8N8E3 955 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 RALAP11233 206 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 SLC12A2P55011 1212 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 RNASE9P60153 205 aaKnown RBP9.1□□□□□ -0.95
CHD7-201ENST00000423902 SPATC1LQ9H0A9 340 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
CHD7-201ENST00000423902 STRIP2Q9ULQ0 834 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms