RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 DUSP6Q16828 381 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 PDE12Q6L8Q7 609 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 NME8Q8N427 588 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 ATOH1Q92858 354 aaPredicted RBP19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 TNPO1Q92973 898 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 ZBTB10Q96DT7 871 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 PCYT2Q99447 389 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 FAM49AQ9H0Q0 323 aaPredicted RBP19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 S1PR5Q9H228 398 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 TMX1Q9H3N1 280 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 TLR9Q9NR96 1032 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 PCDHB12Q9Y5F1 795 aa19.24■□□□□ 0.67
CHCHD3-202ENST00000423635 ERICH2A1L162 156 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 M0QZ92 97 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 SMARCA1P28370 1054 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 SARSP49591 514 aaKnown RBP19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 GATMP50440 423 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 PAK2Q13177 524 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 WTAPQ15007 396 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 RIPOR3Q96MK2 946 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 MAP3K14Q99558 947 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 IL25Q9H293 177 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 AAASQ9NRG9 546 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 LRFN2Q9ULH4 789 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 UBIAD1Q9Y5Z9 338 aa19.23■□□□□ 0.67
CHCHD3-202ENST00000423635 PLXNA4Q9HCM2 1894 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 FSCN2O14926 492 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 ERVFC1P60507 584 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 RBM10P98175 930 aaKnown RBP19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 RASGRP4Q8TDF6 673 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 PIBF1Q8WXW3 757 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 SPZ1Q9BXG8 430 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 PCDHB7Q9Y5E2 793 aa19.22■□□□□ 0.67
CHCHD3-202ENST00000423635 SMIM35A0A1B0GVV1 85 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 FGF18O76093 207 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 TMEM62Q0P6H9 643 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 MTMR1Q13613 665 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 CATIPQ7Z7H3 387 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 RRP36Q96EU6 259 aaKnown RBP19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 JADE2Q9NQC1 790 aa19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 RNF216Q9NWF9 866 aaPredicted RBP19.21■□□□□ 0.67
CHCHD3-202ENST00000423635 PTPRZ1P23471 2315 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 H0Y858 1186 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 CYP21A2P08686 494 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 KRT76Q01546 638 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 SART3Q15020 963 aaKnown RBP19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 B4GALNT3Q6L9W6 998 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 ANKRD54Q6NXT1 300 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 PLPPR4Q7Z2D5 763 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 IGDCC4Q8TDY8 1250 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 RGS18Q9NS28 235 aa19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 U3KPZ7 1027 aaPredicted RBP19.2■□□□□ 0.66
CHCHD3-202ENST00000423635 GALR2O43603 387 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 SRGAP2BP0DMP2 458 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 NUCB1Q02818 461 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 PLCB4Q15147 1175 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 SPOUT1Q5T280 376 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 SYCE2Q6PIF2 218 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 AZI2Q9H6S1 392 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 PSTPIP2Q9H939 334 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 ERVK-5Q9HDB9 667 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 JPH1Q9HDC5 661 aaPredicted RBP19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 C1orf112Q9NSG2 853 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 TYW1Q9NV66 732 aaKnown RBP19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 TMEM260Q9NX78 707 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 LZTS1Q9Y250 596 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 DMDP11532 3685 aa19.19■□□□□ 0.66
CHCHD3-202ENST00000423635 MGEA5O60502 916 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 PDGFBP01127 241 aaPredicted RBP19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 PLCB3Q01970 1234 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 NFX1Q12986 1120 aaKnown RBP19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 TMEM266Q2M3C6 531 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 FAM102BQ5T8I3 360 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 MTHFD1LQ6UB35 978 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 SLC24A5Q71RS6 500 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 COLGALT1Q8NBJ5 622 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 NCOA7Q8NI08 942 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 TRAPPC12Q8WVT3 735 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 LZTS2Q9BRK4 669 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 RWDD1Q9H446 243 aaPredicted RBP19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 CWH43Q9H720 699 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 PKD2L1Q9P0L9 805 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 SLC9A2Q9UBY0 812 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 TRPC6Q9Y210 931 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 LOXHD1Q8IVV2 1947 aa19.18■□□□□ 0.66
CHCHD3-202ENST00000423635 TBKBP1A7MCY6 615 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 C9IYK1 514 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 HOXB8P17481 243 aaPredicted RBP19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 TECP42680 631 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 STAT5BP51692 787 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 FAM189BP81408 668 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 AAMPQ13685 434 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 THNSL1Q8IYQ7 743 aa19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 MRPS27Q92552 414 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 SEC63Q9UGP8 760 aaKnown RBP19.17■□□□□ 0.66
CHCHD3-202ENST00000423635 PLXNA3P51805 1871 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms