RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 ARPP21Q9UBL0 812 aaPredicted RBP7.4□□□□□ -1.22
CNOT4-205ENST00000423368 GGA2Q9UJY4 613 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 SNX12Q9UMY4 172 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 LRCH1Q9Y2L9 728 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 GPSM3Q9Y4H4 160 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 WASF2Q9Y6W5 498 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 NSD2O96028 1365 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 IQSEC2Q5JU85 1478 aa7.4□□□□□ -1.22
CNOT4-205ENST00000423368 SALL3Q9BXA9 1300 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 A0A1B0GTH6 734 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 UBE2Q2LH0YL09 131 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 GIGYF1O75420 1035 aaPredicted RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 CD44P16070 742 aaKnown RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 ARID5AQ03989 594 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 EHHADHQ08426 723 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 MTMR2Q13614 643 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 SAFBQ15424 915 aaKnown RBP eCLIP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 UAP1Q16222 522 aaPredicted RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 FAM209AQ5JX71 171 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 FAM182AQ5T1J6 154 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 PPP2R2DQ66LE6 453 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 DHX32Q7L7V1 743 aaKnown RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 NAT14Q8WUY8 206 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 NEUROG2Q9H2A3 272 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 PALMDQ9NP74 551 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 DDX56Q9NY93 547 aaKnown RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 CTTNBP2NLQ9P2B4 639 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 TELO2Q9Y4R8 837 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 TCOF1Q13428 1488 aaKnown RBP7.4□□□□□ -1.23
CNOT4-205ENST00000423368 SSH2Q76I76 1423 aa7.4□□□□□ -1.23
CNOT4-205ENST00000423368 LINC00854A0A1B0GVQ3 168 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 WDR46O15213 610 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 DAPK3O43293 454 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 TMCC2O75069 709 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 APOEP02649 317 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ALADP13716 330 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 RASA1P20936 1047 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CMA1P23946 247 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 PHEXP78562 749 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 R3HDM1Q15032 1099 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 INTS8Q75QN2 995 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 TXNDC2Q86VQ3 553 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 C12orf50Q8NA57 414 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 GSDMBQ8TAX9 411 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ASAP3Q8TDY4 903 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 FBXO41Q8TF61 875 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 NRG4Q8WWG1 115 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 IFT43Q96FT9 208 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 LTV1Q96GA3 475 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 WDR6Q9NNW5 1121 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 EXOC1Q9NV70 894 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 VPS54Q9P1Q0 977 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 PCDHGA8Q9Y5G5 932 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 AFF2P51816 1311 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 SYNRGQ9UMZ2 1314 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 GOLGA8IPA6NC78 632 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 USP1O94782 785 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 GSTA2P09210 222 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 HARSP12081 509 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CREB1P16220 341 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ZNF18P17022 549 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 PTK2Q05397 1052 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 KRT31Q15323 416 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 SPA17Q15506 151 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ANKDD1AQ495B1 522 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 TMTC4Q5T4D3 741 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 EMC10Q5UCC4 262 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 IZUMO2Q6UXV1 221 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 DSTYKQ6XUX3 929 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 RNF19BQ6ZMZ0 732 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CCDC25Q86WR0 208 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 BRSK2Q8IWQ3 736 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 RIN3Q8TB24 985 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 DQX1Q8TE96 717 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ZNF333Q96JL9 665 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 TM6SF1Q9BZW5 370 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 DDX47Q9H0S4 455 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ADD3Q9UEY8 706 aaKnown RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 GMEB1Q9Y692 573 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 IQCA1LA6NCM1 817 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 NOTOA8MTQ0 251 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 A8MX80 341 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 SPECC1L-ADORA2AF8WAN1 911 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 B3GALNT1O75752 331 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 SUN1O94901 812 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ACADSP16219 412 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 WEE1P30291 646 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 COPB2P35606 906 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CD97P48960 835 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 PTK7Q13308 1070 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CYLC2Q14093 348 aaPredicted RBP7.39□□□□□ -1.23
CNOT4-205ENST00000423368 LLGL1Q15334 1064 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 NFE2L2Q16236 605 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 CARTPTQ16568 116 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 ERMARDQ5T6L9 678 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 SULT6B1Q6IMI4 303 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 KLC3Q6P597 504 aa7.39□□□□□ -1.23
CNOT4-205ENST00000423368 RBM44Q6ZP01 1051 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms