RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 USP11P51784 963 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 LPIN1Q14693 890 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 ANKRD1Q15327 319 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 SWSAP1Q6NVH7 229 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 MIS18BP1Q6P0N0 1132 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 FAM177A1Q8N128 213 aaPredicted RBP17.54■□□□□ 0.4
SPC24-201ENST00000423327 OXER1Q8TDS5 423 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 ATP8B4Q8TF62 1192 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 MBOAT7Q96N66 472 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 FAM49AQ9H0Q0 323 aaPredicted RBP17.54■□□□□ 0.4
SPC24-201ENST00000423327 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 ZNF302Q9NR11 478 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 MAFBQ9Y5Q3 323 aaPredicted RBP17.54■□□□□ 0.4
SPC24-201ENST00000423327 CDY2AQ9Y6F7 541 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 COL4A6Q14031 1691 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 REV3LO60673 3130 aa17.54■□□□□ 0.4
SPC24-201ENST00000423327 PRRC2BQ5JSZ5 2229 aaKnown RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 CYP3A7-CYP3A51PA0A087WV96 503 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 EFCAB14O75071 495 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 CYP3A7P24462 503 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 SLC26A2P50443 739 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 NEK4P51957 841 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 KRT76Q01546 638 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 INF2Q27J81 1249 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 Q4G0T1 1027 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 FBXO47Q5MNV8 452 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 FAM117BQ6P1L5 589 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 PDXDC2PQ6P474 469 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 MTHFD1LQ6UB35 978 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 SMAP1Q8IYB5 467 aaPredicted RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 NSUN7Q8NE18 718 aaKnown RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 SEPT8Q92599 483 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 SLC5A5Q92911 643 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 GAS2L1Q99501 681 aaPredicted RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 KIF2CQ99661 725 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 IFIH1Q9BYX4 1025 aaKnown RBP17.53■□□□□ 0.4
SPC24-201ENST00000423327 PCDHA2Q9Y5H9 948 aa17.53■□□□□ 0.4
SPC24-201ENST00000423327 SLC37A4O43826 429 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 ZNF862O60290 1169 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 HBP1O60381 514 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 JAK2O60674 1132 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 MRPS6P82932 125 aaKnown RBP17.52■□□□□ 0.4
SPC24-201ENST00000423327 NONOQ15233 471 aaKnown RBP eCLIP17.52■□□□□ 0.4
SPC24-201ENST00000423327 UGCGQ16739 394 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 FAM160B1Q5W0V3 765 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 B3GNT9Q6UX72 402 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
SPC24-201ENST00000423327 MYOCDQ8IZQ8 938 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 ETNPPLQ8TBG4 499 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 UNC45AQ9H3U1 944 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 AGO3Q9H9G7 860 aaKnown RBP17.52■□□□□ 0.4
SPC24-201ENST00000423327 PRDM6Q9NQX0 595 aa17.52■□□□□ 0.4
SPC24-201ENST00000423327 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
SPC24-201ENST00000423327 SMIM35A0A1B0GVV1 85 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 FAM205CA6NFA0 338 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 KIF28PB7ZC32 967 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 PSMD10O75832 226 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 HTRA4P83105 476 aaPredicted RBP17.51■□□□□ 0.39
SPC24-201ENST00000423327 TMEM62Q0P6H9 643 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 MOXD1Q6UVY6 613 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 LINC01599Q8WXQ3 324 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 TNFRSF25Q93038 417 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 RIT2Q99578 217 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 RAD9AQ99638 391 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 C22orf23Q9BZE7 217 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 GABBR1Q9UBS5 961 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 PCDHA10Q9Y5I2 948 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 COL1A2P08123 1366 aa17.51■□□□□ 0.39
SPC24-201ENST00000423327 LINC01553A4QN01 128 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 WDR64B1ANS9 1081 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 CHMP2AO43633 222 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 LPXNO60711 386 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 C22orf31O95567 290 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 PSAPP07602 524 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 KLRC1P26715 233 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 LRCH2Q5VUJ6 765 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 KRT40Q6A162 431 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 KRT25Q7Z3Z0 450 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 RSPH3Q86UC2 560 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 SP7Q8TDD2 431 aaPredicted RBP17.5■□□□□ 0.39
SPC24-201ENST00000423327 ARNTL2Q8WYA1 636 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 APBB2Q92870 758 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 ZBED2Q9BTP6 218 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 DISC1Q9NRI5 854 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 TRPV2Q9Y5S1 764 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 TTC3P53804 2025 aa17.5■□□□□ 0.39
SPC24-201ENST00000423327 GAS7O60861 476 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 AMHP03971 560 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 IGFBP4P22692 258 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 CD52P31358 61 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 NR5A1Q13285 461 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 TSHZ1Q6ZSZ6 1077 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 PIK3AP1Q6ZUJ8 805 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
SPC24-201ENST00000423327 KIAA0319LQ8IZA0 1049 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
SPC24-201ENST00000423327 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
SPC24-201ENST00000423327 TEKT3Q9BXF9 490 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms