RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ZNF862O60290 1169 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 EVI5O60447 810 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 B4GALT4O60513 344 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 SLITRK3O94933 977 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 P4HBP07237 508 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 INSRRP14616 1297 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 MARCKSP29966 332 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 QARSP47897 775 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 SLC26A2P50443 739 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 PSMC5P62195 406 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 ZNF200P98182 395 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 CYP4A11Q02928 519 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 DNM1Q05193 864 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 PTPN11Q06124 597 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 CTTNQ14247 550 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 HIC1Q14526 733 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 PDIA5Q14554 519 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 ARL6IP4Q66PJ3 421 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 GDF6Q6KF10 455 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 ANKRD33Q7Z3H0 272 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 SESTD1Q86VW0 696 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 TPH2Q8IWU9 490 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 FAM126BQ8IXS8 530 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 ATP6V0A1Q93050 837 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 DYDC2Q96IM9 177 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 HSD17B14Q9BPX1 270 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 SEZ6LQ9BYH1 1024 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 TRMT13Q9NUP7 481 aaKnown RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 MTMR10Q9NXD2 777 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 WRAP73Q9P2S5 460 aaPredicted RBP10.41□□□□□ -0.74
PDGFC-202ENST00000422544 LRWD1Q9UFC0 647 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 GTF2IRD1Q9UHL9 959 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 CHD7Q9P2D1 2997 aa10.41□□□□□ -0.74
PDGFC-202ENST00000422544 LTBP2Q14767 1821 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 IGSF9BQ9UPX0 1349 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 A0A087WWV3 80 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 C17orf102A2RUQ5 167 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 DDX11L8A8MPP1 907 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 PP2D1A8MPX8 630 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 DCDC2CA8MYV0 355 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 STBD1O95210 358 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 CDC25AP30304 524 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 NASPP49321 788 aaPredicted RBP10.4□□□□□ -0.74
PDGFC-202ENST00000422544 IGBP1P78318 339 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 PRKCEQ02156 737 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 GRIN1Q05586 938 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 FAAP100Q0VG06 881 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 PPFIA1Q13136 1202 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 SLC39A14Q15043 492 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 STK38Q15208 465 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 PTGISQ16647 500 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 C7orf61Q8IZ16 206 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 IGSF22Q8N9C0 903 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 LINC00301Q8NCQ3 95 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 ATP8B4Q8TF62 1192 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 TOX2Q96NM4 488 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 IPO9Q96P70 1041 aaKnown RBP10.4□□□□□ -0.74
PDGFC-202ENST00000422544 LXNQ9BS40 222 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 RAB34Q9BZG1 259 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 NRBP2Q9NSY0 501 aa10.4□□□□□ -0.74
PDGFC-202ENST00000422544 DOCK5Q9H7D0 1870 aa10.4□□□□□ -0.75
PDGFC-202ENST00000422544 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 NRCAMQ92823 1304 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TMEM150BA6NC51 233 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ZBTB39O15060 712 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TREHO43280 583 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 HBP1O60381 514 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 MED24O75448 989 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CD4P01730 458 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 OATP04181 439 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 SPATA31C1P0DKV0 1188 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 GNAT1P11488 350 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CYP2C9P11712 490 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 NCLP19338 710 aaKnown RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 GRIK4Q16099 956 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 XKR3Q5GH77 459 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ATL3Q6DD88 541 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 SH3RF1Q7Z6J0 888 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CATSPER3Q86XQ3 398 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 C4orf19Q8IY42 314 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ERMNQ8TAM6 284 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 NEK9Q8TD19 979 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TRAPPC12Q8WVT3 735 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 BBXQ8WY36 941 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TNPO1Q92973 898 aaKnown RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ZBTB10Q96DT7 871 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 FAM167AQ96KS9 214 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CLIC6Q96NY7 704 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CTAGE1Q96RT6 745 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 SH2D3AQ9BRG2 576 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 POLR3CQ9BUI4 534 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 PRDM5Q9NQX1 630 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 TMEM39AQ9NV64 488 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 FBXO2Q9UK22 296 aaPredicted RBP10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CFAP45Q9UL16 551 aa10.39□□□□□ -0.75
PDGFC-202ENST00000422544 CIZ1Q9ULV3 898 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms