RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DDX11L8A8MPP1 907 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 OATP04181 439 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 P4HBP07237 508 aaKnown RBP17.69■□□□□ 0.42
BRAT1-202ENST00000421712 QARSP47897 775 aaKnown RBP17.69■□□□□ 0.42
BRAT1-202ENST00000421712 CYP4A11Q02928 519 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 ZNF484Q5JVG2 852 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 SERINC5Q86VE9 423 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 DHX38Q92620 1227 aaKnown RBP17.69■□□□□ 0.42
BRAT1-202ENST00000421712 SCLYQ96I15 445 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 DYDC2Q96IM9 177 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 CTAGE1Q96RT6 745 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.69■□□□□ 0.42
BRAT1-202ENST00000421712 CEP131Q9UPN4 1083 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 IGSF9BQ9UPX0 1349 aa17.69■□□□□ 0.42
BRAT1-202ENST00000421712 POTEMA6NI47 508 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 LAD1O00515 517 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 PITPNM1O00562 1244 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 ZNF862O60290 1169 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 CKBP12277 381 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
BRAT1-202ENST00000421712 CSF2RAP15509 400 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 KLRC1P26715 233 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 HOXC8P31273 242 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.421e-7■■■□□ 15
BRAT1-202ENST00000421712 CTTNQ14247 550 aaKnown RBP17.68■□□□□ 0.42
BRAT1-202ENST00000421712 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 C4orf32Q8N8J7 132 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 ZBTB10Q96DT7 871 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 GDF15Q99988 308 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 EIF2AK1Q9BQI3 630 aaKnown RBP17.68■□□□□ 0.42
BRAT1-202ENST00000421712 ZSCAN16Q9H4T2 348 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-202ENST00000421712 RGL1Q9NZL6 768 aa17.68■□□□□ 0.42
BRAT1-202ENST00000421712 SEPT9Q9UHD8 586 aaPredicted RBP17.68■□□□□ 0.42
BRAT1-202ENST00000421712 IQCF3P0C7M6 154 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 SELPP16109 830 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 ADAM17P78536 824 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 SPIRE1Q08AE8 756 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 RESTQ13127 1097 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 XKR3Q5GH77 459 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 TAF2Q6P1X5 1199 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 MTHFD1LQ6UB35 978 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 DTHD1Q6ZMT9 781 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 RUFY4Q6ZNE9 571 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 DEFB128Q7Z7B8 93 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 METTL13Q8N6R0 699 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 DNAJB3Q8WWF6 145 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 WNT8BQ93098 351 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 FAM49AQ9H0Q0 323 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-202ENST00000421712 WNT8AQ9H1J5 351 aa17.67■□□□□ 0.42
BRAT1-202ENST00000421712 COLQQ9Y215 455 aaPredicted RBP17.67■□□□□ 0.42
BRAT1-202ENST00000421712 COL1A2P08123 1366 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 WDR81Q562E7 1941 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 CTSHP09668 335 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 ACRP10323 421 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 MTERF2Q49AM1 385 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 ZNF618Q5T7W0 954 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 FAM173BQ6P4H8 233 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 LRRC8DQ7L1W4 858 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 RPUSD2Q8IZ73 545 aaKnown RBP17.66■□□□□ 0.42
BRAT1-202ENST00000421712 NEK9Q8TD19 979 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 LXNQ9BS40 222 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 FTOQ9C0B1 505 aaKnown RBP eCLIP17.66■□□□□ 0.42
BRAT1-202ENST00000421712 ZSWIM4Q9H7M6 989 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
BRAT1-202ENST00000421712 MBLAC1A4D2B0 266 aaPredicted RBP17.65■□□□□ 0.42
BRAT1-202ENST00000421712 RSPH10B2B2RC85 870 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 SLITRK3O94933 977 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 RSPH10BP0C881 870 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 BMP8BP34820 402 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 CEBPZQ03701 1054 aaKnown RBP17.65■□□□□ 0.42
BRAT1-202ENST00000421712 SF3A1Q15459 793 aaKnown RBP17.65■□□□□ 0.42
BRAT1-202ENST00000421712 TRIM71Q2Q1W2 868 aaKnown RBP17.65■□□□□ 0.42
BRAT1-202ENST00000421712 OTUD6AQ7L8S5 288 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 SH2D3AQ9BRG2 576 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 LRWD1Q9UFC0 647 aa17.65■□□□□ 0.42
BRAT1-202ENST00000421712 LTBP2Q14767 1821 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 M0QZ92 97 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 MAGEB2O15479 319 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 BMP15O95972 392 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 PRPHP41219 470 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
BRAT1-202ENST00000421712 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-202ENST00000421712 TBC1D8BQ0IIM8 1120 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 PDIA5Q14554 519 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 PLA2G4FQ68DD2 849 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 C4orf19Q8IY42 314 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 CCDC43Q96MW1 224 aaKnown RBP17.64■□□□□ 0.41
BRAT1-202ENST00000421712 NIFKQ9BYG3 293 aaKnown RBP17.64■□□□□ 0.41
BRAT1-202ENST00000421712 SUGCTQ9HAC7 445 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 IL23AQ9NPF7 189 aa17.64■□□□□ 0.41
BRAT1-202ENST00000421712 DAXXQ9UER7 740 aaPredicted RBP17.64■□□□□ 0.41
BRAT1-202ENST00000421712 VWA3AA6NCI4 1184 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 ZBTB42B2RXF5 422 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 CAND2O75155 1236 aa17.63■□□□□ 0.41
BRAT1-202ENST00000421712 PARNO95453 639 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms