RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 LRRC15Q8TF66 581 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 CALML4Q96GE6 196 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 TUT1Q9H6E5 874 aaKnown RBP17.59■□□□□ 0.41
DDX55-203ENST00000421670 ZSWIM4Q9H7M6 989 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 ERAP1Q9NZ08 941 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 ZNF215Q9UL58 517 aaPredicted RBP17.59■□□□□ 0.41
DDX55-203ENST00000421670 KIAA1024Q9UPX6 916 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
DDX55-203ENST00000421670 KBTBD13C9JR72 458 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 GOLGA6L22H0YM25 854 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 TFRCP02786 760 aaKnown RBP17.58■□□□□ 0.41
DDX55-203ENST00000421670 GJA8P48165 433 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 ACLYP53396 1101 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 HYIQ5T013 277 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 PLPPR4Q7Z2D5 763 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 KCNK18Q7Z418 384 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 PIGOQ8TEQ8 1089 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 TMEM106CQ9BVX2 250 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 LMBRD1Q9NUN5 540 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 FAM13BQ9NYF5 915 aa17.58■□□□□ 0.41
DDX55-203ENST00000421670 EVPLQ92817 2033 aa17.58■□□□□ 0.4
DDX55-203ENST00000421670 DNM1LO00429 736 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 OATP04181 439 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 NDUFA8P51970 172 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 UBE2HP62256 183 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 PSMC6P62333 389 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 PLCB4Q15147 1175 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 KIAA0753Q2KHM9 967 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 SH2D3AQ9BRG2 576 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 MTG1Q9BT17 334 aaPredicted RBP17.57■□□□□ 0.4
DDX55-203ENST00000421670 RNPEPQ9H4A4 650 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 SEPT9Q9UHD8 586 aaPredicted RBP17.57■□□□□ 0.4
DDX55-203ENST00000421670 MYH11P35749 1972 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 A0A1W2PQ45 241 aaPredicted RBP17.57■□□□□ 0.4
DDX55-203ENST00000421670 A0A1W2PQY0 241 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 MOXD2PA6NHM9 499 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 E9PMD0 336 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 POLR2DO15514 142 aaKnown RBP17.57■□□□□ 0.4
DDX55-203ENST00000421670 KPNA6O60684 536 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 YWHABP31946 246 aaKnown RBP17.57■□□□□ 0.4
DDX55-203ENST00000421670 MCM4P33991 863 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 PSEN2P49810 448 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 SLC26A2P50443 739 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 MFSD10Q14728 455 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 PLA2G4FQ68DD2 849 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 C4orf19Q8IY42 314 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 NT5C3AQ9H0P0 336 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 CCDC39Q9UFE4 941 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 KCNH3Q9ULD8 1083 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 TRPC6Q9Y210 931 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 HPSEQ9Y251 543 aa17.57■□□□□ 0.4
DDX55-203ENST00000421670 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX55-203ENST00000421670 STBD1O95210 358 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
DDX55-203ENST00000421670 RRAGBQ5VZM2 374 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 ANO5Q75V66 913 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 ATP8B4Q8TF62 1192 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 DHX58Q96C10 678 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
DDX55-203ENST00000421670 KATNAL1Q9BW62 490 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 PHF24Q9UPV7 400 aa17.56■□□□□ 0.4
DDX55-203ENST00000421670 FAM237AA0A1B0GTK4 181 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 DDX11L8A8MPP1 907 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 HAS3O00219 553 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 LYPLA2O95372 231 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 LIG1P18858 919 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 MUTP22033 750 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 STAT6P42226 847 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 E2F4Q16254 413 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 NAALADL2Q58DX5 795 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 XKR3Q5GH77 459 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 CCDC73Q6ZRK6 1079 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 DIS3LQ8TF46 1054 aaKnown RBP17.55■□□□□ 0.4
DDX55-203ENST00000421670 FAM167AQ96KS9 214 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 NACC1Q96RE7 527 aa17.55■□□□□ 0.4
DDX55-203ENST00000421670 SLC26A4O43511 780 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 SYKP43405 635 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 NPEPPSP55786 919 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 TRAPPC12Q8WVT3 735 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 BBXQ8WY36 941 aaPredicted RBP17.54■□□□□ 0.4
DDX55-203ENST00000421670 VTI1AQ96AJ9 217 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 GLT1D1Q96MS3 346 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 BHMT2Q9H2M3 363 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 BLOC1S4Q9NUP1 217 aa17.54■□□□□ 0.4
DDX55-203ENST00000421670 GRIN2DO15399 1336 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 NR1I2O75469 434 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 SMIM10L2AP0DMW4 78 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 SMIM10L2BP0DMW5 78 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 NBPF20Q3BBV1 942 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 MTERF2Q49AM1 385 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 FMR1NBQ8N0W7 255 aaPredicted RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 CCDC43Q96MW1 224 aaKnown RBP17.53■□□□□ 0.4
DDX55-203ENST00000421670 DNM3Q9UQ16 869 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 ZBTB42B2RXF5 422 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 CABYRO75952 493 aa17.53■□□□□ 0.4
DDX55-203ENST00000421670 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
DDX55-203ENST00000421670 INSRRP14616 1297 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms