RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 WNT8BQ93098 351 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 TTC12Q9H892 705 aaPredicted RBP16.23■□□□□ 0.19
PTPN18-204ENST00000420717 TUBE1Q9UJT0 475 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 PCDHA12Q9UN75 941 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 CEP131Q9UPN4 1083 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 TRPC6Q9Y210 931 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 SAMM50Q9Y512 469 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 PCDHB6Q9Y5E3 794 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 MORC2Q9Y6X9 1032 aaPredicted RBP16.23■□□□□ 0.19
PTPN18-204ENST00000420717 SCN5AQ14524 2016 aa16.23■□□□□ 0.19
PTPN18-204ENST00000420717 STX6O43752 255 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPN18-204ENST00000420717 LYPLA2O95372 231 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PFKMP08237 780 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 CKBP12277 381 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 CYP2C18P33260 490 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 CHMP4BP1P59074 171 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PSMC5P62195 406 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 ZNF200P98182 395 aaPredicted RBP16.22■□□□□ 0.19
PTPN18-204ENST00000420717 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PPIGQ13427 754 aaKnown RBP eCLIP16.22■□□□□ 0.196e-8■□□□□ 10.3
PTPN18-204ENST00000420717 ZNF174Q15697 407 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 CHRDL2Q6WN34 429 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 TMEM199Q8N511 208 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 HSD17B14Q9BPX1 270 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PPP1R12CQ9BZL4 782 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PPME1Q9Y570 386 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
PTPN18-204ENST00000420717 VPS37CA5D8V6 355 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-204ENST00000420717 C22orf31O95567 290 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
PTPN18-204ENST00000420717 IQCF3P0C7M6 154 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 SELPP16109 830 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 QARSP47897 775 aaKnown RBP16.21■□□□□ 0.19
PTPN18-204ENST00000420717 MDM2Q00987 491 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-204ENST00000420717 NBR1Q14596 966 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 TARBP2Q15633 366 aaKnown RBP16.21■□□□□ 0.19
PTPN18-204ENST00000420717 XKR3Q5GH77 459 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 FAM26DQ5JW98 314 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 LINC01465Q8N7H1 131 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 CEP89Q96ST8 783 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 LOXHD1Q8IVV2 1947 aa16.21■□□□□ 0.19
PTPN18-204ENST00000420717 TRIOBPQ9H2D6 2365 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 SMIM35A0A1B0GVV1 85 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 MARCH6O60337 910 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 BMP15O95972 392 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 CXCL10P02778 98 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 ATP2B1P20020 1258 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 TXKP42681 527 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 PTGDRQ13258 359 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 ARL6IP4Q66PJ3 421 aaKnown RBP16.2■□□□□ 0.18
PTPN18-204ENST00000420717 PSRC1Q6PGN9 363 aaPredicted RBP16.2■□□□□ 0.18
PTPN18-204ENST00000420717 MTHFD1LQ6UB35 978 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 LXNQ9BS40 222 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 ZSCAN16Q9H4T2 348 aaPredicted RBP16.2■□□□□ 0.18
PTPN18-204ENST00000420717 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
PTPN18-204ENST00000420717 COLQQ9Y215 455 aaPredicted RBP16.2■□□□□ 0.18
PTPN18-204ENST00000420717 POTEMA6NI47 508 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 CSF2RAP15509 400 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 MUTP22033 750 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 EPHB4P54760 987 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 MGAT3Q09327 533 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 PDIA5Q14554 519 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 GPNMBQ14956 572 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 TMEM266Q2M3C6 531 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 NCAPH2Q6IBW4 605 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 RUFY4Q6ZNE9 571 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 ANO5Q75V66 913 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 RETREG2Q8NC44 543 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 BANK1Q8NDB2 785 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 EIF2AK1Q9BQI3 630 aaKnown RBP16.19■□□□□ 0.18
PTPN18-204ENST00000420717 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
PTPN18-204ENST00000420717 UBE2OQ9C0C9 1292 aaKnown RBP16.19■□□□□ 0.18
PTPN18-204ENST00000420717 ZSWIM4Q9H7M6 989 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 NRBP2Q9NSY0 501 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 WRAP73Q9P2S5 460 aaPredicted RBP16.19■□□□□ 0.18
PTPN18-204ENST00000420717 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
PTPN18-204ENST00000420717 IGKV6-21A0A0C4DH24 114 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 MAGEB2O15479 319 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 SLITRK3O94933 977 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 HSP90AA1P07900 732 aaKnown RBP16.18■□□□□ 0.18
PTPN18-204ENST00000420717 MBTPS1Q14703 1052 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 ZNF618Q5T7W0 954 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 C16orf59Q7L2K0 433 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 FERMT3Q86UX7 667 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 CKAP2LQ8IYA6 745 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 ZNF710Q8N1W2 664 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 NME8Q8N427 588 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 TRAPPC12Q8WVT3 735 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 RAB34Q9BZG1 259 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 TUFT1Q9NNX1 390 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 FOXD4L1Q9NU39 408 aa16.18■□□□□ 0.18
PTPN18-204ENST00000420717 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms