RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 TGFB1I1O43294 461 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 TLR2O60603 784 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 FAM13AO94988 1023 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 ATP1A1P05023 1023 aaKnown RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 PPP1R2P41236 205 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 HSD17B4P51659 736 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 CLCN6P51797 869 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 BAATQ14032 418 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 UGCGQ16739 394 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 KCTD19Q17RG1 926 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 TRIM59Q8IWR1 403 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 ZNF397Q8NF99 534 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 RMDN3Q96TC7 470 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 CCDC94Q9BW85 323 aaPredicted RBP9.7□□□□□ -0.86
SNCA-206ENST00000420646 GPRC5CQ9NQ84 441 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 SALL4Q9UJQ4 1053 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 PLAGL2Q9UPG8 496 aa9.7□□□□□ -0.86
SNCA-206ENST00000420646 CETN3O15182 167 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 WDR46O15213 610 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 SOX10P56693 466 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 ZSWIM2Q8NEG5 633 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 NEK11Q8NG66 645 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 JAKMIP2Q96AA8 810 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 NUP58Q9BVL2 599 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 ST7Q9NRC1 585 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 SYNPO2Q9UMS6 1093 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 CTDP1Q9Y5B0 961 aaPredicted RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 ASTN1O14525 1302 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 RBAK-RBAKDNI3L0D1 243 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 VWA5AO00534 786 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 AKR1B10O60218 316 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 LRRN2O75325 713 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 FGFR1OPO95684 399 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 NR3C1P04150 777 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 PTPRAP18433 802 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 DNA2P51530 1060 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 MTMR1Q13613 665 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 ODR4Q5SWX8 454 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 EPM2AIP1Q7L775 607 aaPredicted RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 FAM133AQ8N9E0 248 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 TEKT3Q9BXF9 490 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 PPP1R9AQ9ULJ8 1098 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 PITPNM2Q9BZ72 1349 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 DDNO94850 711 aaPredicted RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 RHOXF2BP0C7M4 288 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 CYP2J2P51589 502 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 KIF11P52732 1056 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 NPEPPSP55786 919 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 BACE1P56817 501 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 MRPS25P82663 173 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 PTPROQ16827 1216 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 PLA2G4FQ68DD2 849 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 DAW1Q8N136 415 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 RHOXF2Q9BQY4 288 aa9.69□□□□□ -0.86
SNCA-206ENST00000420646 CGNQ9P2M7 1197 aaKnown RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 AJAP1Q9UKB5 411 aaPredicted RBP9.69□□□□□ -0.86
SNCA-206ENST00000420646 BUB1O43683 1085 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 TUBB4AP04350 444 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 FSTL1Q12841 308 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 RAPGEF1Q13905 1077 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 HGSNATQ68CP4 663 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 MCTP2Q6DN12 878 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 SNRNP48Q6IEG0 339 aaKnown RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 RNF207Q6ZRF8 634 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 MIER3Q7Z3K6 550 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 RETREG2Q8NC44 543 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 NOA1Q8NC60 698 aaKnown RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 ELMO3Q96BJ8 720 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 FIZ1Q96SL8 496 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 MAP7D2Q96T17 732 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 NAPGQ99747 312 aaPredicted RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 PCIF1Q9H4Z3 704 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 ARMCX3Q9UH62 379 aaPredicted RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 CAPN6Q9Y6Q1 641 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 PLA2G6O60733 806 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 HIP1RO75146 1068 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 MOCS3O95396 460 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 CXCR5P32302 372 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 PGM5Q15124 567 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 FAM178BQ8IXR5 827 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 ZNF280CQ8ND82 737 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 LPAR1Q92633 364 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 KIFC3Q9BVG8 833 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 IFIH1Q9BYX4 1025 aaKnown RBP9.68□□□□□ -0.86
SNCA-206ENST00000420646 R3HDMLQ9H3Y0 253 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 PICK1Q9NRD5 415 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 RNF146Q9NTX7 359 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 SMARCAL1Q9NZC9 954 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 CDC23Q9UJX2 597 aa9.68□□□□□ -0.86
SNCA-206ENST00000420646 FER1L6Q2WGJ9 1857 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms