RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FNDC1Q4ZHG4 1894 aaPredicted RBP14.77□□□□□ -0.05
LINC00339-203ENST00000420503 STXBP3O00186 592 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 PER2O15055 1255 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 NDUFV1P49821 464 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 WWC2Q6AWC2 1192 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 HEATR3Q7Z4Q2 680 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 SKAP1Q86WV1 359 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 PRSS33Q8NF86 280 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 POF1BQ8WVV4 589 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 TCEANC2Q96MN5 208 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 LSG1Q9H089 658 aaKnown RBP14.76□□□□□ -0.05
LINC00339-203ENST00000420503 SMARCAD1Q9H4L7 1026 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 JPH1Q9HDC5 661 aaPredicted RBP14.76□□□□□ -0.05
LINC00339-203ENST00000420503 KCNH7Q9NS40 1196 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 TMEM260Q9NX78 707 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 TRPV2Q9Y5S1 764 aa14.76□□□□□ -0.05
LINC00339-203ENST00000420503 CACNA1HO95180 2353 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 DDX39AO00148 427 aaKnown RBP14.75□□□□□ -0.05
LINC00339-203ENST00000420503 CCNE2O96020 404 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 KIF5BP33176 963 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 ACTR2P61160 394 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 HERC4Q5GLZ8 1057 aaPredicted RBP14.75□□□□□ -0.05
LINC00339-203ENST00000420503 TMTC3Q6ZXV5 915 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 RSPH3Q86UC2 560 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 MICU3Q86XE3 530 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 NPAS4Q8IUM7 802 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 CMTR2Q8IYT2 770 aaKnown RBP14.75□□□□□ -0.05
LINC00339-203ENST00000420503 GIMAP8Q8ND71 665 aaPredicted RBP14.75□□□□□ -0.05
LINC00339-203ENST00000420503 RUFY2Q8WXA3 655 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 MAP3K14Q99558 947 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 SLC9A2Q9UBY0 812 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 CDH22Q9UJ99 828 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 FAM50BQ9Y247 325 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 GINS2Q9Y248 185 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 RWDD3Q9Y3V2 267 aa14.75□□□□□ -0.05
LINC00339-203ENST00000420503 CNTNAP5Q8WYK1 1306 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 SLC27A2O14975 620 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 SCG2P13521 617 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 PAK2Q13177 524 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 FAM102BQ5T8I3 360 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 CASC1Q6TDU7 716 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 SMRP1Q8NCR6 262 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 MXRA8Q9BRK3 442 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 PLVAPQ9BX97 442 aa14.74□□□□□ -0.05
LINC00339-203ENST00000420503 CELF4Q9BZC1 486 aaKnown RBP14.74□□□□□ -0.05
LINC00339-203ENST00000420503 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
LINC00339-203ENST00000420503 USP15Q9Y4E8 981 aaPredicted RBP14.74□□□□□ -0.05
LINC00339-203ENST00000420503 CCDC69A6NI79 296 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 SPDYE3A6NKU9 549 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 SMARCA1P28370 1054 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 ERVFC1P60507 584 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 APOBRQ0VD83 1088 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 NFX1Q12986 1120 aaKnown RBP14.73□□□□□ -0.05
LINC00339-203ENST00000420503 MTHFD1LQ6UB35 978 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 EFHBQ8N7U6 833 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 P2RX5Q93086 422 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 CDHR1Q96JP9 859 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 APOL5Q9BWW9 433 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 AGO4Q9HCK5 861 aaKnown RBP14.73□□□□□ -0.05
LINC00339-203ENST00000420503 ERVK-5Q9HDB9 667 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 PCDHA2Q9Y5H9 948 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 KMT2EQ8IZD2 1858 aa14.73□□□□□ -0.05
LINC00339-203ENST00000420503 RRN3P2A6NIE6 340 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 ZBTB42B2RXF5 422 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 NCK2O43639 380 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 EYA4O95677 639 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 FGFR1P11362 822 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 ATP4AP20648 1035 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 SP100P23497 879 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-203ENST00000420503 MCM5P33992 734 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 STAT5BP51692 787 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 KRT76Q01546 638 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 IER5Q5VY09 327 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 TRMT1LQ7Z2T5 733 aaKnown RBP14.72□□□□□ -0.05
LINC00339-203ENST00000420503 CCDC60Q8IWA6 550 aaPredicted RBP14.72□□□□□ -0.05
LINC00339-203ENST00000420503 FANCBQ8NB91 859 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 EDAQ92838 391 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 ANO3Q9BYT9 981 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 BRPF3Q9ULD4 1205 aa14.72□□□□□ -0.05
LINC00339-203ENST00000420503 TMEM221A6NGB7 291 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 TBKBP1A7MCY6 615 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 LOC730098B7Z3J9 87 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 M0R296 226 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 KLRC1P26715 233 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 PBX3P40426 434 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 GNAQP50148 359 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 FUT2Q10981 343 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 CREB3L3Q68CJ9 461 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 KIAA0319LQ8IZA0 1049 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 ZNF668Q96K58 619 aaPredicted RBP14.71□□□□□ -0.05
LINC00339-203ENST00000420503 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 UPF3BQ9BZI7 483 aaKnown RBP14.71□□□□□ -0.05
LINC00339-203ENST00000420503 AZI2Q9H6S1 392 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
LINC00339-203ENST00000420503 SMIM35A0A1B0GVV1 85 aa14.7□□□□□ -0.06
LINC00339-203ENST00000420503 FAM86B1E9PN63 330 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms