RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 DDTLA6NHG4 134 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EBAG9O00559 213 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NDUFB10O96000 172 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 H2AFZP0C0S5 128 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MYBP10242 640 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CASP5P51878 434 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PTPROQ16827 1216 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 H2AFVQ71UI9 128 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PEX26Q7Z412 305 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PACSIN1Q9BY11 444 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TRAF3IP3Q9Y228 551 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TRPC5Q9UL62 973 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PCDHGC5Q9Y5F6 944 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 A6NNZ2 444 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SFI1A8K8P3 1242 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GAP43P17677 238 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 STAT1P42224 750 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GNGT1P63211 74 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TUBB8Q3ZCM7 444 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MEI1Q5TIA1 1274 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EHMT1Q9H9B1 1298 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 AGPSO00116 658 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 TULP2O00295 520 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GH2P01242 217 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CCDC172P0C7W6 258 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SREBF1P36956 1147 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CARSP49589 748 aaKnown RBP12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NNTQ13423 1086 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 Q4G0T1 1027 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ETNPPLQ8TBG4 499 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 BCAS4Q8TDM0 211 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PIGOQ8TEQ8 1089 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FRMD4BQ9Y2L6 1034 aa12.79□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM86B1E9PN63 330 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GLI1P08151 1106 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM86B2P0C5J1 330 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SYCP3Q8IZU3 236 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SYCE1Q8N0S2 351 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CAVIN3Q969G5 261 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PBKQ96KB5 322 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GANQ9H2C0 597 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RGL1Q9NZL6 768 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MYH10P35580 1976 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KLRG2A4D1S0 409 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 MSH4O15457 936 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 AKAP3O75969 853 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PON1P27169 355 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PSMC2P35998 433 aaKnown RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 LRCH2Q5VUJ6 765 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 KCTD16Q68DU8 428 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 DAAM2Q86T65 1068 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM186BQ8IYM0 893 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RABEP2Q9H5N1 569 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 AFF2P51816 1311 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FRMD3A2A2Y4 597 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RSPH10B2B2RC85 870 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 EYA4O95677 639 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 RSPH10BP0C881 870 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CTTNQ14247 550 aaKnown RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 SHROOM1Q2M3G4 852 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FOXR1Q6PIV2 292 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 WHAMMQ8TF30 809 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 DNAJC18Q9H819 358 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 NAGPAQ9UK23 515 aa12.78□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZEB2O60315 1214 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 GAS7O60861 476 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FERP16591 822 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 STRIP1Q5VSL9 837 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ZNF571Q7Z3V5 609 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 FAM178BQ8IXR5 827 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 CSRNP1Q96S65 589 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 ARHGEF10LQ9HCE6 1279 aa12.77□□□□□ -0.36
CSPG4P3Y-201ENST00000418188 PGRMC1O00264 195 aaKnown RBP12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 TRIM66O15016 1216 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 SLC16A3O15427 465 aaKnown RBP12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 GFPT2O94808 682 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 KIF4AO95239 1232 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 STAT2P52630 851 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 PRPF4BQ13523 1007 aaKnown RBP12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 USP38Q8NB14 1042 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 MBOAT7Q96N66 472 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 PARVGQ9HBI0 331 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 KRIT1O00522 736 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 TNFRSF8P28908 595 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 CCT5P48643 541 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 FMNL3Q8IVF7 1028 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 GMCL1Q96IK5 515 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 ZIM3Q96PE6 472 aa12.77□□□□□ -0.37
CSPG4P3Y-201ENST00000418188 RUSC1Q9BVN2 902 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms