RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TELO2Q9Y4R8 837 aa20.62■□□□□ 0.89
VCP-202ENST00000417448 MRPL42Q9Y6G3 142 aaKnown RBP20.62■□□□□ 0.89
VCP-202ENST00000417448 PROB1E7EW31 1015 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 ENPP3O14638 875 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 PPP1R11O60927 126 aaPredicted RBP20.61■□□□□ 0.89
VCP-202ENST00000417448 DGKIO75912 1065 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 NRIP1P48552 1158 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 FANCBQ8NB91 859 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 LMBR1Q8WVP7 490 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 P2RX5Q93086 422 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 PHF7Q9BWX1 381 aaPredicted RBP20.61■□□□□ 0.89
VCP-202ENST00000417448 TM6SF1Q9BZW5 370 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 PDRG1Q9NUG6 133 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 LOXHD1Q8IVV2 1947 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 GVINP1Q7Z2Y8 2422 aa20.61■□□□□ 0.89
VCP-202ENST00000417448 ZBTB43O43298 467 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 TGFB3P10600 412 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 HOXA13P31271 388 aaPredicted RBP20.6■□□□□ 0.89
VCP-202ENST00000417448 RBM10P98175 930 aaKnown RBP20.6■□□□□ 0.89
VCP-202ENST00000417448 LPIN1Q14693 890 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 SYNE3Q6ZMZ3 975 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 RBM23Q86U06 439 aaKnown RBP20.6■□□□□ 0.89
VCP-202ENST00000417448 LINC01599Q8WXQ3 324 aa20.6■□□□□ 0.89
VCP-202ENST00000417448 GOLGA8AA7E2F4 631 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 DTNBO60941 627 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 CDC27P30260 824 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 ICAM3P32942 547 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 ARHGAP4P98171 946 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 MGAT3Q09327 533 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 RUFY4Q6ZNE9 571 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 KLHL23Q8NBE8 558 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 PPP2R3CQ969Q6 453 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 IRF2BPLQ9H1B7 796 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 RIOX1Q9H6W3 641 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 FAM217BQ9NTX9 383 aaPredicted RBP20.59■□□□□ 0.89
VCP-202ENST00000417448 DNAH14Q0VDD8 3507 aa20.59■□□□□ 0.89
VCP-202ENST00000417448 GNAT1P11488 350 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 KIF5BP33176 963 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 ADD1P35611 737 aaKnown RBP20.58■□□□□ 0.89
VCP-202ENST00000417448 CCT2P78371 535 aaKnown RBP20.58■□□□□ 0.89
VCP-202ENST00000417448 RTN1Q16799 776 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 PTPN21Q16825 1174 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 CRIPAKQ8N1N5 446 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 VN1R2Q8NFZ6 395 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 POF1BQ8WVV4 589 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 SUSD6Q92537 303 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 MTMR8Q96EF0 704 aa20.58■□□□□ 0.89
VCP-202ENST00000417448 PRR23AA6NEV1 266 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 NOP56O00567 594 aaKnown RBP20.57■□□□□ 0.88
VCP-202ENST00000417448 CALM1P0DP23 149 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 CALM2P0DP24 149 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 CALM3P0DP25 149 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 ANAPC15P60006 121 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 STK3Q13188 491 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 TMTC3Q6ZXV5 915 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 MAP3K14Q99558 947 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 GPR20Q99678 358 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 AMNQ9BXJ7 453 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 AGXT2Q9BYV1 514 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 C22orf23Q9BZE7 217 aa20.57■□□□□ 0.88
VCP-202ENST00000417448 NCOA5Q9HCD5 579 aaKnown RBP20.57■□□□□ 0.88
VCP-202ENST00000417448 ZBTB5O15062 677 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 CCND2P30279 289 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 SEMA3FQ13275 785 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 NAALADL2Q58DX5 795 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 CYFIP1Q7L576 1253 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 CMTR2Q8IYT2 770 aaKnown RBP20.56■□□□□ 0.88
VCP-202ENST00000417448 MYO10Q9HD67 2058 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 DMXL1Q9Y485 3027 aa20.56■□□□□ 0.88
VCP-202ENST00000417448 GALR2O43603 387 aaPredicted RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 ATF7P17544 494 aaPredicted RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 PDIA3P30101 505 aaKnown RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 METAP2P50579 478 aaKnown RBP eCLIP20.55■□□□□ 0.88
VCP-202ENST00000417448 NEK4P51957 841 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 FBXO47Q5MNV8 452 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 METTL7BQ6UX53 244 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 RTN4RL1Q86UN2 441 aaPredicted RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 ATP8B4Q8TF62 1192 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 RIPOR3Q96MK2 946 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 KIF2CQ99661 725 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 AGO3Q9H9G7 860 aaKnown RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 MAP3K20Q9NYL2 800 aaKnown RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 ZNF292O60281 2723 aa20.55■□□□□ 0.88
VCP-202ENST00000417448 FNDC1Q4ZHG4 1894 aaPredicted RBP20.55■□□□□ 0.88
VCP-202ENST00000417448 PNMA6FA0A0J9YX94 578 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 PER2O15055 1255 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 EIF5BO60841 1220 aaKnown RBP20.54■□□□□ 0.88
VCP-202ENST00000417448 NBL1P41271 181 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 GATMP50440 423 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 AK2P54819 239 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 MRPS9P82933 396 aaKnown RBP20.54■□□□□ 0.88
VCP-202ENST00000417448 PAN2Q504Q3 1202 aaKnown RBP20.54■□□□□ 0.88
VCP-202ENST00000417448 UTP14CQ5TAP6 766 aaKnown RBP20.54■□□□□ 0.88
VCP-202ENST00000417448 SPZ1Q9BXG8 430 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 TRPC6Q9Y210 931 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 PCDHA1Q9Y5I3 950 aa20.54■□□□□ 0.88
VCP-202ENST00000417448 NRCAMQ92823 1304 aa20.53■□□□□ 0.88
VCP-202ENST00000417448 GNAQP50148 359 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms