RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 AGO3Q9H9G7 860 aaKnown RBP17.19■□□□□ 0.34
UBXN4-203ENST00000416538 SUGCTQ9HAC7 445 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 C6orf50Q9HD87 102 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
UBXN4-203ENST00000416538 ZBTB42B2RXF5 422 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 IPO5O00410 1097 aaKnown RBP17.18■□□□□ 0.34
UBXN4-203ENST00000416538 AMHP03971 560 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 ATP4AP20648 1035 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 ZNF76P36508 570 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 STAT5BP51692 787 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 MRPS6P82932 125 aaKnown RBP17.18■□□□□ 0.34
UBXN4-203ENST00000416538 TFF2Q03403 129 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 TJAP1Q5JTD0 557 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 PLPPR4Q7Z2D5 763 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 CYP46A1Q9Y6A2 500 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 XIRP2A4UGR9 3374 aa17.18■□□□□ 0.34
UBXN4-203ENST00000416538 CIITAP33076 1130 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 PRR16Q569H4 304 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 CCDC12Q8WUD4 166 aaPredicted RBP17.17■□□□□ 0.34
UBXN4-203ENST00000416538 TOP1MTQ969P6 601 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 TGS1Q96RS0 853 aaKnown RBP17.17■□□□□ 0.34
UBXN4-203ENST00000416538 AZI2Q9H6S1 392 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 RC3H2Q9HBD1 1191 aaKnown RBP17.17■□□□□ 0.34
UBXN4-203ENST00000416538 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
UBXN4-203ENST00000416538 PLXNA4Q9HCM2 1894 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 POTEB3A0JP26 581 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 RRN3P2A6NIE6 340 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 M0R2N6 131 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 UPP2O95045 317 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 LINC00271P0C7V0 271 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 SETQ01105 290 aaPredicted RBP17.16■□□□□ 0.34
UBXN4-203ENST00000416538 STK3Q13188 491 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 POTEBQ6S5H4 581 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 APBB2Q92870 758 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 GJA10Q969M2 543 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 ASB2Q96Q27 587 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 ZNF577Q9BSK1 485 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 INSL6Q9Y581 213 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 ARID2Q68CP9 1835 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 IGSF9BQ9UPX0 1349 aa17.16■□□□□ 0.34
UBXN4-203ENST00000416538 GTPBP6O43824 516 aaPredicted RBP17.15■□□□□ 0.34
UBXN4-203ENST00000416538 GNA11P29992 359 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 CD52P31358 61 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 AKAP17AQ02040 695 aaKnown RBP17.15■□□□□ 0.34
UBXN4-203ENST00000416538 MTHFD1LQ6UB35 978 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 TSHZ1Q6ZSZ6 1077 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 ATP8B4Q8TF62 1192 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
UBXN4-203ENST00000416538 ZNF274Q96GC6 653 aaPredicted RBP17.15■□□□□ 0.34
UBXN4-203ENST00000416538 ZNF302Q9NR11 478 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 PCDHA2Q9Y5H9 948 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 TRPV2Q9Y5S1 764 aa17.15■□□□□ 0.34
UBXN4-203ENST00000416538 BACH1O14867 736 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 KCNQ1P51787 676 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 SCRN1Q12765 414 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 RTN4RL1Q86UN2 441 aaPredicted RBP17.14■□□□□ 0.33
UBXN4-203ENST00000416538 SH3GLB2Q9NR46 395 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 PDRG1Q9NUG6 133 aa17.14■□□□□ 0.33
UBXN4-203ENST00000416538 SMIM35A0A1B0GVV1 85 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 MSH4O15457 936 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 ZNF862O60290 1169 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 TDP2O95551 362 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 C22orf31O95567 290 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 SLC26A2P50443 739 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
UBXN4-203ENST00000416538 UGCGQ16739 394 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 MCTP2Q6DN12 878 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
UBXN4-203ENST00000416538 PDXDC2PQ6P474 469 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 RSPH3Q86UC2 560 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 SPDYE1Q8NFV5 336 aaPredicted RBP17.13■□□□□ 0.33
UBXN4-203ENST00000416538 TMEM40Q8WWA1 233 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
UBXN4-203ENST00000416538 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 CDHR5Q9HBB8 845 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 GJB4Q9NTQ9 266 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 TPCN1Q9ULQ1 816 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 PCDHA4Q9UN74 947 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 MAFBQ9Y5Q3 323 aaPredicted RBP17.13■□□□□ 0.33
UBXN4-203ENST00000416538 KDM3AQ9Y4C1 1321 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 COL1A2P08123 1366 aa17.13■□□□□ 0.33
UBXN4-203ENST00000416538 ENPP3O14638 875 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 HBP1O60381 514 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 DEXIO95424 95 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 LARGE1O95461 756 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 KLRC1P26715 233 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 NLRP5P59047 1200 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 MRPS5P82675 430 aaKnown RBP17.12■□□□□ 0.33
UBXN4-203ENST00000416538 SKIV2LQ15477 1246 aaKnown RBP17.12■□□□□ 0.33
UBXN4-203ENST00000416538 TMEM266Q2M3C6 531 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 EPC2Q52LR7 807 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 FAM160B1Q5W0V3 765 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 MIS18BP1Q6P0N0 1132 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 KIAA0319LQ8IZA0 1049 aa17.12■□□□□ 0.33
UBXN4-203ENST00000416538 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms