RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 PDE1BQ01064 536 aa11.48□□□□□ -0.57
COL12A1-203ENST00000416123 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SLC16A4O15374 487 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 RNF40O75150 1001 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 S100BP04271 92 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 LIFRP42702 1097 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 R3HDM1Q15032 1099 aaKnown RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTEEQ6S8J3 1075 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTEB3A0JP26 581 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTECB2RU33 542 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 CLDN3O15551 220 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 PRELPP51888 382 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 POTEBQ6S5H4 581 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ANGPTL3Q9Y5C1 460 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SESN3P58005 492 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 PRAMEF18Q5VWM3 479 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 CDKL2Q92772 493 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ALKBH8Q96BT7 664 aaKnown RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 MTRQ99707 1265 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 FAM213AQ9BRX8 229 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 VCX3BQ9H321 246 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SERPING1P05155 500 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SRGAP2BP0DMP2 458 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ARL4AP40617 200 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 PLTPP55058 493 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF568Q3ZCX4 644 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SCN4BQ8IWT1 228 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SEC31AO94979 1220 aaKnown RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SCARF1Q14162 830 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 TMED2Q15363 201 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 C10orf76Q5T2E6 689 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ATP8B3O60423 1300 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 PFKFB3Q16875 520 aaPredicted RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 OLA1Q9NTK5 396 aaKnown RBP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 CDC27P30260 824 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 RESP18Q5W5W9 173 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL12A1-203ENST00000416123 SPATA33Q96N06 139 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 NCAPGQ9BPX3 1015 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF302Q9NR11 478 aa11.47□□□□□ -0.57
COL12A1-203ENST00000416123 EFCAB8A8MWE9 144 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 RBBP5Q15291 538 aaKnown RBP11.46□□□□□ -0.57
COL12A1-203ENST00000416123 STAG2Q8N3U4 1231 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 PPME1Q9Y570 386 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 PIK3C2BO00750 1634 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 MYO3BQ8WXR4 1341 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 ZNF521Q96K83 1311 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 ARHGAP24Q8N264 748 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 ELP3Q9H9T3 547 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 ATP6V0A4Q9HBG4 840 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 SH3GLB2Q9NR46 395 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 PSMA2P25787 234 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 ATP6V1E2Q96A05 226 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 RNF146Q9NTX7 359 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 GABBR1Q9UBS5 961 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 WDR91A4D1P6 747 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 CDC25BP30305 580 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 SLCO1A2P46721 670 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 IL1RL1Q01638 556 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 CYP27A1Q02318 531 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 MTMR2Q13614 643 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 RCSD1Q6JBY9 416 aa11.46□□□□□ -0.57
COL12A1-203ENST00000416123 THAP9Q9H5L6 903 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 ZBTB12Q9Y330 459 aaPredicted RBP11.46□□□□□ -0.58
COL12A1-203ENST00000416123 BRD3Q15059 726 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 LRRC8CQ8TDW0 803 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 TCP11Q8WWU5 503 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 TRIM11Q96F44 468 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 PDE11AQ9HCR9 933 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.58
COL12A1-203ENST00000416123 GOLGA8KD6RF30 607 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 E9PMD0 336 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 F5H6K3 240 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 PRR29P0C7W0 189 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 KLRC3Q07444 240 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 PSMD2Q13200 908 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 PPP2R5EQ16537 467 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 BBS5Q8N3I7 341 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 DEPDC1BQ8WUY9 529 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 BAIAP2L1Q9UHR4 511 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.58
COL12A1-203ENST00000416123 HEXIM1O94992 359 aaKnown RBP11.45□□□□□ -0.58
COL12A1-203ENST00000416123 JAK3P52333 1124 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 RCN2Q14257 317 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 JADE1Q6IE81 842 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 GDAP1Q8TB36 358 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 PODNQ7Z5L7 613 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 NDST4Q9H3R1 872 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 KLHL14Q9P2G3 628 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 PP2D1A8MPX8 630 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 ERICH1Q86X53 443 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
COL12A1-203ENST00000416123 LRRD1A4D1F6 860 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms