RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 TIGD1Q96MW7 591 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 NAP1L4Q99733 375 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 MMTAG2Q9BU76 263 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 HIPK3Q9H422 1215 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 DDX41Q9UJV9 622 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 FRMPD4Q14CM0 1322 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 POTEMA6NI47 508 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 MMP3P08254 477 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 ZNF76P36508 570 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 PSMC6P62333 389 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 KARSQ15046 597 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 RPUSD2Q8IZ73 545 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 C7orf31Q8N865 590 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 CNNM3Q8NE01 707 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 PPTC7Q8NI37 304 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 AFG1LQ8WV93 481 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 COPS5Q92905 334 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 EMID1Q96A84 441 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 RNPC3Q96LT9 517 aaKnown RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 SPATA33Q96N06 139 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 PPP1R12CQ9BZL4 782 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 RBSNQ9H1K0 784 aa10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 TTC12Q9H892 705 aaPredicted RBP10.34□□□□□ -0.75
CHRNA1-206ENST00000416004 MSH4O15457 936 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 GGPS1O95749 300 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 PRR29P0C7W0 189 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 TYRO3Q06418 890 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 BFSP2Q13515 415 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 PNOCQ13519 176 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 NBPF20Q3BBV1 942 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 PCNX4Q63HM2 1172 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 CCDC62Q6P9F0 684 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 PSRC1Q6PGN9 363 aaPredicted RBP10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 SLC43A3Q8NBI5 491 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 AK8Q96MA6 479 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 PLIN2Q99541 437 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 TSPY26PQ9H489 355 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 TBX21Q9UL17 535 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
CHRNA1-206ENST00000416004 MEIS1O00470 390 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 PPFIA4O75335 1185 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ARIH2O95376 493 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CD4P01730 458 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ARP10275 920 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ITGB5P18084 799 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 UBA7P41226 1012 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 MRPS9P82933 396 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ARHGAP1Q07960 439 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 SPIRE1Q08AE8 756 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CCDC173Q0VFZ6 552 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CEP55Q53EZ4 464 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CELF3Q5SZQ8 465 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 PDXDC2PQ6P474 469 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 MTRQ99707 1265 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CCSER1Q9C0I3 900 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 PCDH10Q9P2E7 1040 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 LRWD1Q9UFC0 647 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ZNF215Q9UL58 517 aaPredicted RBP10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 MAFGO15525 162 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 MARCH6O60337 910 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 B4GALT4O60513 344 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 SLFN14P0C7P3 912 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ACTN1P12814 892 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CASP1P29466 404 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ZRSR1Q15695 479 aaKnown RBP10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 HS1BP3Q53T59 392 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 TMEM63BQ5T3F8 832 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 CABP7Q86V35 215 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 ZSCAN30Q86W11 494 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 PLA2G4DQ86XP0 818 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 RNF214Q8ND24 703 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 STAMQ92783 540 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 DISC1Q9NRI5 854 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 TCEAL9Q9UHQ7 104 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 VAV3Q9UKW4 847 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 PCDHA12Q9UN75 941 aa10.32□□□□□ -0.76
CHRNA1-206ENST00000416004 SCN10AQ9Y5Y9 1956 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 BIN1O00499 593 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 TBX3O15119 743 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PFKMP08237 780 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PLCG1P19174 1290 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 ICAM3P32942 547 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 TXLNAP40222 546 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 AFMP43652 599 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 GRB10Q13322 594 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PDIA5Q14554 519 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 SHHQ15465 462 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 ECM1Q16610 540 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 TMEM266Q2M3C6 531 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 ZNF697Q5TEC3 545 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 SLFN12Q8IYM2 578 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 GPRASP2Q96D09 838 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PAGE5Q96GU1 130 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PNMA5Q96PV4 448 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 PPP1R9BQ96SB3 815 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 MXRA8Q9BRK3 442 aa10.31□□□□□ -0.76
CHRNA1-206ENST00000416004 TRPV6Q9H1D0 765 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms