RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 IPO5O00410 1097 aaKnown RBP15.34■□□□□ 0.05
CPNE1-209ENST00000415920 GAS7O60861 476 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 GGPS1O95749 300 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 IQCF3P0C7M6 154 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 ICAM3P32942 547 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 ATP2C1P98194 919 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-209ENST00000415920 GPNMBQ14956 572 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 KCNV1Q6PIU1 500 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 SLFN12Q8IYM2 578 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 SDF4Q9BRK5 362 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 KCNMB3Q9NPA1 279 aa15.34■□□□□ 0.05
CPNE1-209ENST00000415920 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 LAD1O00515 517 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 TBX3O15119 743 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 CHMP2AO43633 222 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
CPNE1-209ENST00000415920 YEATS4O95619 227 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 SUPT20HL2P0C7V6 817 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 BMP1P13497 986 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 KCNA2P16389 499 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 TXKP42681 527 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 NASPP49321 788 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-209ENST00000415920 ITGB3BPQ13352 177 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-209ENST00000415920 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 GDPD2Q9HCC8 539 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-209ENST00000415920 CFAP45Q9UL16 551 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 MTCH2Q9Y6C9 303 aa15.33■□□□□ 0.04
CPNE1-209ENST00000415920 ATP9AO75110 1047 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 GH1P01241 217 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 PFKMP08237 780 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 MARCKSP29966 332 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-209ENST00000415920 TAP1Q03518 808 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 NEDD9Q14511 834 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 PTPAQ15257 358 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 ATL3Q6DD88 541 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 NCAPH2Q6IBW4 605 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 NFRKBQ6P4R8 1299 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 CCDC62Q6P9F0 684 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 DHX37Q8IY37 1157 aaKnown RBP15.32■□□□□ 0.04
CPNE1-209ENST00000415920 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 ARNTL2Q8WYA1 636 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 DHX38Q92620 1227 aaKnown RBP15.32■□□□□ 0.04
CPNE1-209ENST00000415920 KAT2BQ92831 832 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 HAS1Q92839 578 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 SLC5A5Q92911 643 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 SPATA32Q96LK8 384 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 DDX41Q9UJV9 622 aaKnown RBP15.32■□□□□ 0.04
CPNE1-209ENST00000415920 BDP1A6H8Y1 2624 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 NFASCO94856 1347 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 XIRP2A4UGR9 3374 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 TRANK1O15050 2925 aa15.32■□□□□ 0.04
CPNE1-209ENST00000415920 LCHNA4D1U4 455 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 VWA3AA6NCI4 1184 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 POTEMA6NI47 508 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CPNE1-209ENST00000415920 NKRFO15226 690 aaKnown RBP eCLIP15.31■□□□□ 0.04
CPNE1-209ENST00000415920 SPTLC2O15270 562 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 MAFGO15525 162 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 MMP3P08254 477 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 TGFB3P10600 412 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 SP2Q02086 613 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 GDF6Q6KF10 455 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-209ENST00000415920 CYFIP1Q7L576 1253 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 HERC6Q8IVU3 1022 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 LINC00301Q8NCQ3 95 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 GIMAP8Q8ND71 665 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-209ENST00000415920 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 SLC9A7Q96T83 725 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 TTC12Q9H892 705 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-209ENST00000415920 MLXIPQ9HAP2 919 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 SLC9A2Q9UBY0 812 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 MYH11P35749 1972 aa15.31■□□□□ 0.04
CPNE1-209ENST00000415920 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 LPXNO60711 386 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 PSMD10O75832 226 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 ACTN1P12814 892 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 RFC2P35250 354 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 PRPHP41219 470 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 TECP42680 631 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 KRT76Q01546 638 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 SKIV2LQ15477 1246 aaKnown RBP15.3■□□□□ 0.04
CPNE1-209ENST00000415920 PTGISQ16647 500 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 TPRNQ4KMQ1 711 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 CELF3Q5SZQ8 465 aaKnown RBP15.3■□□□□ 0.04
CPNE1-209ENST00000415920 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 DTHD1Q6ZMT9 781 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 KCNG4Q8TDN1 519 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 RIT2Q99578 217 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 UNC45AQ9H3U1 944 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 BCAS3Q9H6U6 928 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 TBC1D22BQ9NU19 505 aa15.3■□□□□ 0.04
CPNE1-209ENST00000415920 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms