RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 DHX36Q9H2U1 1008 aaKnown RBP10.71□□□□□ -0.69
CD44-206ENST00000415148 CD248Q9HCU0 757 aa10.71□□□□□ -0.69
CD44-206ENST00000415148 ARMCX3Q9UH62 379 aaPredicted RBP10.71□□□□□ -0.69
CD44-206ENST00000415148 MYH7BA7E2Y1 1941 aa10.71□□□□□ -0.69
CD44-206ENST00000415148 ARFGEF1Q9Y6D6 1849 aa10.71□□□□□ -0.7
CD44-206ENST00000415148 LY75O60449 1722 aa10.71□□□□□ -0.7
CD44-206ENST00000415148 USP17L10C9JJH3 530 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 GFPT2O94808 682 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 KRT18P05783 430 aaKnown RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 UCHL3P15374 230 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 ADRA2BP18089 450 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NR2F2P24468 414 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 RPL13P26373 211 aaKnown RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 HPDP32754 393 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 FLT3P36888 993 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 MNAT1P51948 309 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 PTK2Q05397 1052 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 UAP1Q16222 522 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 PTGISQ16647 500 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 MICALCLQ6ZW33 695 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 YTHDF3Q7Z739 585 aaKnown RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 ARFGAP2Q8N6H7 521 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 SYT2Q8N9I0 419 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 LRRC57Q8N9N7 239 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 LRRC45Q96CN5 670 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NENFQ9UMX5 172 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 GREB1LQ9C091 1923 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 QSER1Q2KHR3 1735 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 POTEB3A0JP26 581 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 GTPBP10A4D1E9 387 aaKnown RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 POTECB2RU33 542 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 SLC16A3O15427 465 aaKnown RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 MEFVO15553 781 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 FLOT1O75955 427 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NR1D1P20393 614 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 RPA1P27694 616 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 HOXA10P31260 410 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 GIT2Q14161 759 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 EXOC3L4Q17RC7 722 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 BMT2Q1RMZ1 405 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 Q4G0T1 1027 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 TTBK2Q6IQ55 1244 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 POTEBQ6S5H4 581 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 ZNF571Q7Z3V5 609 aaPredicted RBP10.7□□□□□ -0.7
CD44-206ENST00000415148 SLFN11Q7Z7L1 901 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 VPS36Q86VN1 386 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 AMIGO3Q86WK7 504 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 MKL1Q969V6 931 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 SPAG5Q96R06 1193 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 CRAMP1Q96RY5 1269 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 CCT8L2Q96SF2 557 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NCAPGQ9BPX3 1015 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NAGPAQ9UK23 515 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 DNM3Q9UQ16 869 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 PLAAQ9Y263 795 aa10.7□□□□□ -0.7
CD44-206ENST00000415148 NPHP3-ACAD11A0A0J9YXS1 232 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 DCDC2CA8MYV0 355 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 KCNK3O14649 394 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 MED24O75448 989 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 PON1P27169 355 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 SHMT1P34896 483 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 ITGB3BPQ13352 177 aaPredicted RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 QPCTQ16769 361 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 SWT1Q5T5J6 900 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 ALKBH5Q6P6C2 394 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 PTF1AQ7RTS3 328 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 NLRP14Q86W24 1093 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 RASGEF1CQ8N431 466 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 C3orf20Q8ND61 904 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 MYCBPAPQ8TBZ2 947 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 DCAF4Q8WV16 495 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 CRYGNQ8WXF5 182 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD44-206ENST00000415148 COA1Q9GZY4 146 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 CENPHQ9H3R5 247 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 TMBIM4Q9HC24 238 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 SUCLA2Q9P2R7 463 aaPredicted RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 POLLQ9UGP5 575 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 GOLGA6L10A6NI86 522 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 PPP1R37O75864 691 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 TMOD1P28289 359 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 MDH1P40925 334 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 EIF6P56537 245 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 IFT88Q13099 833 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 PICALMQ13492 652 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 MTMR3Q13615 1198 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 CEP85LQ5SZL2 805 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 CATSPER3Q86XQ3 398 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 OTUD6BQ8N6M0 293 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 FAM20AQ96MK3 541 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 ANO3Q9BYT9 981 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 SLITRK6Q9H5Y7 841 aa10.69□□□□□ -0.7
CD44-206ENST00000415148 PPANQ9NQ55 473 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
CD44-206ENST00000415148 GEMIN8Q9NWZ8 242 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms