RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 GHRHRQ02643 423 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 ZMYM1Q5SVZ6 1142 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 STOX1Q6ZVD7 989 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 CYFIP1Q7L576 1253 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 MRPS27Q92552 414 aaKnown RBP18.31■□□□□ 0.52
CPNE1-208ENST00000414711 TTC14Q96N46 770 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 NGRNQ9NPE2 291 aaKnown RBP18.31■□□□□ 0.52
CPNE1-208ENST00000414711 CYP26B1Q9NR63 512 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 RNF216Q9NWF9 866 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-208ENST00000414711 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
CPNE1-208ENST00000414711 FAM208BQ5VWN6 2430 aa18.31■□□□□ 0.52
CPNE1-208ENST00000414711 EOMESO95936 686 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 SARSP49591 514 aaKnown RBP18.3■□□□□ 0.52
CPNE1-208ENST00000414711 PAK2Q13177 524 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 TDGQ13569 410 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 NEDD9Q14511 834 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 KIAA1841Q6NSI8 718 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
CPNE1-208ENST00000414711 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
CPNE1-208ENST00000414711 PADI3Q9ULW8 664 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 PCDHB7Q9Y5E2 793 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 SQORQ9Y6N5 450 aa18.3■□□□□ 0.52
CPNE1-208ENST00000414711 FNDC1Q4ZHG4 1894 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 KAT6AQ92794 2004 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 LAG3P18627 525 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 HOXA13P31271 388 aaPredicted RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 PLCB3Q01970 1234 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 GRIK4Q16099 956 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 GNPTABQ3T906 1256 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 RARS2Q5T160 578 aaKnown RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 TYW1Q9NV66 732 aaKnown RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 CDV3Q9UKY7 258 aaKnown RBP18.29■□□□□ 0.52
CPNE1-208ENST00000414711 TELO2Q9Y4R8 837 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 MYH6P13533 1939 aa18.29■□□□□ 0.52
CPNE1-208ENST00000414711 FANCMQ8IYD8 2048 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 STK25O00506 426 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 ADRB1P08588 477 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 SP9P0CG40 484 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 RFX1P22670 979 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 SP4Q02446 784 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 VPS53Q5VIR6 699 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 IER5Q5VY09 327 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 SUMF1Q8NBK3 374 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-208ENST00000414711 TMX1Q9H3N1 280 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 MAP3K20Q9NYL2 800 aaKnown RBP18.28■□□□□ 0.52
CPNE1-208ENST00000414711 TRPV2Q9Y5S1 764 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 DOCK5Q9H7D0 1870 aa18.28■□□□□ 0.52
CPNE1-208ENST00000414711 IGSF9BQ9UPX0 1349 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 DENND4AQ7Z401 1863 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 M0QZ92 97 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 RPLP2P05387 115 aaKnown RBP18.27■□□□□ 0.52
CPNE1-208ENST00000414711 ATAT1Q5SQI0 421 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 MARCH8Q5T0T0 291 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 XRRA1Q6P2D8 792 aa18.27■□□□□ 0.52
CPNE1-208ENST00000414711 TBC1D8BQ0IIM8 1120 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 SEMA3FQ13275 785 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
CPNE1-208ENST00000414711 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 FAM102BQ5T8I3 360 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 TMC7Q7Z402 723 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 C12orf76Q8N812 135 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-208ENST00000414711 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-208ENST00000414711 AMNQ9BXJ7 453 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 CWH43Q9H720 699 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 JMJD4Q9H9V9 463 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 NCDNQ9UBB6 729 aa18.26■□□□□ 0.51
CPNE1-208ENST00000414711 SPATA31C2B4DYI2 1134 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 KINO60870 393 aaKnown RBP18.25■□□□□ 0.51
CPNE1-208ENST00000414711 CLASP2O75122 1294 aaKnown RBP18.25■□□□□ 0.51
CPNE1-208ENST00000414711 MARK3P27448 753 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 PDE4AP27815 886 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 LMNB2Q03252 620 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 TMEM62Q0P6H9 643 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 SPECC1Q5M775 1068 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 GPR161Q8N6U8 529 aaKnown RBP18.25■□□□□ 0.51
CPNE1-208ENST00000414711 PNMA1Q8ND90 353 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 ZBTB10Q96DT7 871 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 INPP4AQ96PE3 977 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-208ENST00000414711 KCNK12Q9HB15 430 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 VAT1LQ9HCJ6 419 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 ZBTB40Q9NUA8 1239 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 DZANK1Q9NVP4 752 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
CPNE1-208ENST00000414711 DCDC2BA2VCK2 349 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 KRBA1A5PL33 1030 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 C2orf71A6NGG8 1288 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 FIBPO43427 364 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 CFHP08603 1231 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 PPM1AP35813 382 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 TCF7P36402 384 aaPredicted RBP18.24■□□□□ 0.51
CPNE1-208ENST00000414711 IGBP1P78318 339 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 TMEM266Q2M3C6 531 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 KANK3Q6NY19 840 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 OTOP3Q7RTS5 596 aa18.24■□□□□ 0.51
CPNE1-208ENST00000414711 FCHSD1Q86WN1 690 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms