RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 ZNF577Q9BSK1 485 aa17.67■□□□□ 0.42
ACTB-202ENST00000414620 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
ACTB-202ENST00000414620 AGO3Q9H9G7 860 aaKnown RBP17.67■□□□□ 0.42
ACTB-202ENST00000414620 IPO5O00410 1097 aaKnown RBP17.66■□□□□ 0.42
ACTB-202ENST00000414620 NEFLP07196 543 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 CYP3A4P08684 503 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 BMP1P13497 986 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 GNA11P29992 359 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 PDIA3P30101 505 aaKnown RBP17.66■□□□□ 0.42
ACTB-202ENST00000414620 TOB2Q14106 344 aaPredicted RBP17.66■□□□□ 0.42
ACTB-202ENST00000414620 FAM160B1Q5W0V3 765 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 MTHFD1LQ6UB35 978 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 ABHD15Q6UXT9 468 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 RUFY3Q7L099 469 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 TRMT1LQ7Z2T5 733 aaKnown RBP17.66■□□□□ 0.42
ACTB-202ENST00000414620 FBXL16Q8N461 479 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 LINC01599Q8WXQ3 324 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 HLA-CQ95604 372 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 ZNF302Q9NR11 478 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 LMCD1Q9NZU5 365 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 COG5Q9UP83 839 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
ACTB-202ENST00000414620 FNDC1Q4ZHG4 1894 aaPredicted RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 IGKV6D-21A0A0A0MT36 114 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 DHX15O43143 795 aaKnown RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 IFNAR1P17181 557 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 IBSPP21815 317 aaPredicted RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 SETQ01105 290 aaPredicted RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 GPM6BQ13491 265 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 PRR16Q569H4 304 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 IER5Q5VY09 327 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 SWSAP1Q6NVH7 229 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 MIS18BP1Q6P0N0 1132 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 PDXDC2PQ6P474 469 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 TMEM192Q8IY95 271 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 CCDC148Q8NFR7 591 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 TNPO1Q92973 898 aaKnown RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 IL17RAQ96F46 866 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 SAMD11Q96NU1 681 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 PPP1R16BQ96T49 567 aa17.65■□□□□ 0.42
ACTB-202ENST00000414620 UPF3BQ9BZI7 483 aaKnown RBP17.65■□□□□ 0.42
ACTB-202ENST00000414620 BRWD1Q9NSI6 2320 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 ENPP3O14638 875 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 HBP1O60381 514 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 KLRC1P26715 233 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 CTNNB1P35222 781 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 STK3Q13188 491 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 CKAP2LQ8IYA6 745 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 FIBCD1Q8N539 461 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 ATP8B4Q8TF62 1192 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 ZSWIM6Q9HCJ5 1215 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 TCEAL9Q9UHQ7 104 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 GINS2Q9Y248 185 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 PLXNA4Q9HCM2 1894 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 ADGRA3Q8IWK6 1321 aa17.64■□□□□ 0.41
ACTB-202ENST00000414620 SMIM35A0A1B0GVV1 85 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 CSPG5O95196 566 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 RPLP2P05387 115 aaKnown RBP17.63■□□□□ 0.41
ACTB-202ENST00000414620 ATP4AP20648 1035 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 SLC26A2P50443 739 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 NLRP5P59047 1200 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 PAK2Q13177 524 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 TMEM266Q2M3C6 531 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 MCTP2Q6DN12 878 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 BICD2Q8TD16 824 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 CELF4Q9BZC1 486 aaKnown RBP17.63■□□□□ 0.41
ACTB-202ENST00000414620 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
ACTB-202ENST00000414620 H3BNC9 293 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 EVCP57679 992 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 KRT76Q01546 638 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 SSRP1Q08945 709 aaKnown RBP17.62■□□□□ 0.41
ACTB-202ENST00000414620 PTPROQ16827 1216 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
ACTB-202ENST00000414620 RTN4RL1Q86UN2 441 aaPredicted RBP17.62■□□□□ 0.41
ACTB-202ENST00000414620 TRIM22Q8IYM9 498 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 MRPL38Q96DV4 380 aaKnown RBP17.62■□□□□ 0.41
ACTB-202ENST00000414620 RC3H2Q9HBD1 1191 aaKnown RBP17.62■□□□□ 0.41
ACTB-202ENST00000414620 TBC1D22BQ9NU19 505 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 GABBR1Q9UBS5 961 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 PADI3Q9ULW8 664 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 SAMM50Q9Y512 469 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 IGSF9BQ9UPX0 1349 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 COL1A2P08123 1366 aa17.62■□□□□ 0.41
ACTB-202ENST00000414620 CPLX1O14810 134 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 EDIL3O43854 480 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 CIITAP33076 1130 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 NFX1Q12986 1120 aaKnown RBP17.61■□□□□ 0.41
ACTB-202ENST00000414620 BTG3Q14201 252 aaPredicted RBP17.61■□□□□ 0.41
ACTB-202ENST00000414620 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
ACTB-202ENST00000414620 GJA10Q969M2 543 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 LENG9Q96B70 501 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 AIFM3Q96NN9 605 aa17.61■□□□□ 0.41
ACTB-202ENST00000414620 UBE2ZQ9H832 354 aaPredicted RBP17.61■□□□□ 0.41
ACTB-202ENST00000414620 MYO7AQ13402 2215 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 ZBTB42B2RXF5 422 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 CHMP2AO43633 222 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 DTNBO60941 627 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 PSAPP07602 524 aa17.6■□□□□ 0.41
ACTB-202ENST00000414620 LINC00271P0C7V0 271 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms