RNA–Protein interactions for RNA: ENST00000414008.3

HCG27-202, Transcript of HLA complex group 27, humanhuman

TSL 4

Gene HCG27, Length 829 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-202ENST00000414008 ALDH8A1Q9H2A2 487 aaPredicted RBP11.09□□□□□ -0.63
HCG27-202ENST00000414008 UPF2Q9HAU5 1272 aaKnown RBP11.09□□□□□ -0.63
HCG27-202ENST00000414008 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
HCG27-202ENST00000414008 ZNF236Q9UL36 1845 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 TGFBR3LH3BV60 316 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 OIP5O43482 229 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 CNGA1P29973 690 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 CCND3P30281 292 aaPredicted RBP11.08□□□□□ -0.64
HCG27-202ENST00000414008 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 PRAMEF19Q5SWL8 479 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 TBC1D5Q92609 795 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 ZNF274Q96GC6 653 aaPredicted RBP11.08□□□□□ -0.64
HCG27-202ENST00000414008 FGD4Q96M96 766 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 DEFB118Q96PH6 123 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 AVENQ9NQS1 362 aaPredicted RBP11.08□□□□□ -0.64
HCG27-202ENST00000414008 PAK6Q9NQU5 681 aaPredicted RBP11.08□□□□□ -0.64
HCG27-202ENST00000414008 ADD3Q9UEY8 706 aaKnown RBP11.08□□□□□ -0.64
HCG27-202ENST00000414008 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
HCG27-202ENST00000414008 BAZ2BQ9UIF8 2168 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 KIAA0100Q14667 2235 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 ASB14A6NK59 587 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SGPL1O95470 568 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SNAI1O95863 264 aaPredicted RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 CFBP00751 764 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 CYBAP13498 195 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 CAPN2P17655 700 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 GJA8P48165 433 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 RBM25P49756 843 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 NEK4P51957 841 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 AK2P54819 239 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 CCT2P78371 535 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 TYRO3Q06418 890 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 C11orf91Q3C1V1 193 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SAMD3Q8N6K7 520 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 GALNT6Q8NCL4 622 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 TRPV1Q8NER1 839 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 DNERQ8NFT8 737 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SYTL5Q8TDW5 730 aaPredicted RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 U2AF1L4Q8WU68 220 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 COL26A1Q96A83 441 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
HCG27-202ENST00000414008 KLK14Q9P0G3 267 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 NRBP1Q9UHY1 535 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 HCN2Q9UL51 889 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 CNPY2Q9Y2B0 182 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 CNTNAP5Q8WYK1 1306 aa11.07□□□□□ -0.64
HCG27-202ENST00000414008 NID2Q14112 1375 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 CENPFP49454 3210 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 LOC102724159A0A0B4J2E5 919 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 OPLAHO14841 1288 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 MSCO60682 206 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 ADH6P28332 368 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 GHRHRQ02643 423 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 PWP2Q15269 919 aaKnown RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 ARMCX2Q7L311 632 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 DDX20Q9UHI6 824 aaKnown RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 DNMT3AQ9Y6K1 912 aaPredicted RBP11.06□□□□□ -0.64
HCG27-202ENST00000414008 ASTN1O14525 1302 aa11.06□□□□□ -0.64
HCG27-202ENST00000414008 B4DLN1 442 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 CPLX1O14810 134 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 SEPT4O43236 478 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 ZNF865P0CJ78 1059 aaPredicted RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 IFNAR1P17181 557 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 HSD17B4P51659 736 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 MRPL12P52815 198 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 AKAP17AQ02040 695 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 PDE4CQ08493 712 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 STK3Q13188 491 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 ACVR2BQ13705 512 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 NTRK3Q16288 839 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 ZNF468Q5VIY5 522 aaPredicted RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 SLCO4C1Q6ZQN7 724 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 HEATR3Q7Z4Q2 680 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 MORC4Q8TE76 937 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 NSUN6Q8TEA1 469 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 TAAR1Q96RJ0 339 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 RMDN3Q96TC7 470 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 MPHOSPH6Q99547 160 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 KIF2CQ99661 725 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 BACH2Q9BYV9 841 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 NCOA5Q9HCD5 579 aaKnown RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 COL20A1Q9P218 1284 aa11.05□□□□□ -0.64
HCG27-202ENST00000414008 ZHX1Q9UKY1 873 aaPredicted RBP11.05□□□□□ -0.64
HCG27-202ENST00000414008 PRPF3O43395 683 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms