RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TPCN2Q8NHX9 752 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 PCDHB13Q9Y5F0 798 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 MYH4Q9Y623 1939 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 SCN7AQ01118 1682 aa15.93■□□□□ 0.14
SEMA3F-202ENST00000413852 TRAPPC3O43617 180 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 FGGP02679 453 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 USP11P51784 963 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 CCDC38Q502W7 563 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 RIC8AQ9NPQ8 531 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 SEPT11Q9NVA2 429 aaKnown RBP15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 RASSF9O75901 435 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 AKAP3O75969 853 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 CYP11B2P19099 503 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 PON1P27169 355 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 TM4SF1P30408 202 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 GSCP56915 257 aaPredicted RBP15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 COBLL1Q53SF7 1204 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 SETDB2Q96T68 719 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 SELENOSQ9BQE4 189 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 MXD3Q9BW11 206 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 JMJD4Q9H9V9 463 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 TMOD4Q9NZQ9 345 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 BAG3O95817 575 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 PPP1R2P41236 205 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 IFNAR2P48551 515 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 IFFO1Q0D2I5 559 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 DPY19L2P1Q6NXN4 242 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 MICALCLQ6ZW33 695 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 CPLX4Q7Z7G2 160 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 PALB2Q86YC2 1186 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 NEDD1Q8NHV4 660 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 TAS2R14Q9NYV8 317 aa15.92■□□□□ 0.14
SEMA3F-202ENST00000413852 PGRMC1O00264 195 aaKnown RBP15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 DDX3XO00571 662 aaKnown RBP eCLIP15.91■□□□□ 0.144e-7■■■■■ 27.8
SEMA3F-202ENST00000413852 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 LRRN2O75325 713 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 PPP2R2AP63151 447 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 IFI35P80217 286 aaPredicted RBP15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 SETQ01105 290 aaPredicted RBP15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 SFR1Q86XK3 245 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 CPNE8Q86YQ8 564 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 GLYCTKQ8IVS8 523 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 RUBCNQ92622 972 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 AIPL1Q9NZN9 384 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 TPX2Q9ULW0 747 aaKnown RBP15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 ANKRD20A8PQ5CZ79 823 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 DCAF12L1Q5VU92 463 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 CYB5D1Q6P9G0 228 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 TMC3Q7Z5M5 1100 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 SNX24Q9Y343 169 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 LAMB1P07942 1786 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 DOT1LQ8TEK3 1739 aa15.91■□□□□ 0.14
SEMA3F-202ENST00000413852 TMEM110-MUSTN1A8MSY1 372 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 ZBTB39O15060 712 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 ZBTB48P10074 688 aaPredicted RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 CDC25CP30307 473 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 C16orf86Q6ZW13 317 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 P2RX7Q99572 595 aaKnown RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 MLXIPLQ9NP71 852 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 MPHOSPH10O00566 681 aaKnown RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 BUB1BO60566 1050 aaPredicted RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 SCTRP47872 440 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 EXOC3L4Q17RC7 722 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 FUKQ8N0W3 1084 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 RNF14Q9UBS8 474 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 SPDYE3A6NKU9 549 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 PDE6BP35913 854 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 PLTPP55058 493 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 COG2Q14746 738 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 FAM133BQ5BKY9 247 aaKnown RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 PPP4R3AQ6IN85 833 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 N4BP2L2Q92802 583 aaPredicted RBP15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 ARHGEF26Q96DR7 871 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 CCDC113Q9H0I3 377 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 RIOX1Q9H6W3 641 aa15.9■□□□□ 0.14
SEMA3F-202ENST00000413852 F8VZ95 297 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 CETN3O15182 167 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 RDXP35241 583 aaKnown RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 SMTNP53814 917 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 GALCP54803 685 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 ACCSLQ4AC99 568 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 LNX1Q8TBB1 728 aaPredicted RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 ELMO3Q96BJ8 720 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 CTNND1O60716 968 aaKnown RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 CCDC65Q8IXS2 484 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 IQCDQ96DY2 449 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 LZTS2Q9BRK4 669 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 LUC7LQ9NQ29 371 aaKnown RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 ARMCX3Q9UH62 379 aaPredicted RBP15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 EP400Q96L91 3159 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 USP8P40818 1118 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 PARP9Q8IXQ6 854 aa15.89■□□□□ 0.13
SEMA3F-202ENST00000413852 PROM2Q8N271 834 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms