RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 PLA2G6O60733 806 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 PSMD10O75832 226 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 FAM13AO94988 1023 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 NR3C1P04150 777 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 MUTP22033 750 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 APBA1Q02410 837 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 C2orf54Q08AI8 447 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 CTTNQ14247 550 aaKnown RBP12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 NAB2Q15742 525 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 FAM160B2Q86V87 743 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 TPH2Q8IWU9 490 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 FAM133AQ8N9E0 248 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 SPATA4Q8NEY3 305 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 RUBCNQ92622 972 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 SLC5A5Q92911 643 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 VCPKMTQ9H867 229 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 RNF14Q9UBS8 474 aa12.61□□□□□ -0.39
TRAFD1-202ENST00000412615 EIF3DO15371 548 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 BUB1O43683 1085 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 AKAP3O75969 853 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 VIL1P09327 827 aaKnown RBP12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 PRELPP51888 382 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 ARID5AQ03989 594 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 CEP55Q53EZ4 464 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 C10orf76Q5T2E6 689 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 KLHDC7AQ5VTJ3 777 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 NFRKBQ6P4R8 1299 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 CCNI2Q6ZMN8 369 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 RTKN2Q8IZC4 609 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 PIGOQ8TEQ8 1089 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 EXOC4Q96A65 974 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 DYDC2Q96IM9 177 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 TLR10Q9BXR5 811 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 MED4Q9NPJ6 270 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 ADAMTS1Q9UHI8 967 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 ASTN1O14525 1302 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 A0A087X0T9 212 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 TBC1D12O60347 775 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 GAS7O60861 476 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 RAD17O75943 681 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 FAM228BP0C875 321 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 SLC9A1P19634 815 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 GMLQ99445 158 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 WDR11Q9BZH6 1224 aa12.6□□□□□ -0.39
TRAFD1-202ENST00000412615 UCHL3P15374 230 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 PON1P27169 355 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 TNNT3P45378 269 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 KIAA0753Q2KHM9 967 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 DCAF17Q5H9S7 520 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 TCERG1LQ5VWI1 586 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 GBP6Q6ZN66 633 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 C1orf186Q6ZWK4 172 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 FAM71BQ8TC56 605 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 CCDC102AQ96A19 550 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 NACC1Q96RE7 527 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 PSD3Q9NYI0 1048 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 SEL1LQ9UBV2 794 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 ERICH4A6NGS2 130 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 CHMP2AO43633 222 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 ACTN1P12814 892 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 CXCR5P32302 372 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 STXBP4Q6ZWJ1 553 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 PSMD1Q99460 953 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 PARVGQ9HBI0 331 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 VEZTQ9HBM0 779 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 STK32BQ9NY57 414 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 KCND2Q9NZV8 630 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 VPS18Q9P253 973 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 FEM1BQ9UK73 627 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 FBXL5Q9UKA1 691 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 CNTNAP1P78357 1384 aa12.59□□□□□ -0.39
TRAFD1-202ENST00000412615 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 SFI1A8K8P3 1242 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 NCK2O43639 380 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PPP1R12BO60237 982 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 ZMYND10O75800 440 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 KLRC1P26715 233 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 SETQ01105 290 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 EPHA7Q15375 998 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 NFIL3Q16649 462 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 CFAP221Q4G0U5 840 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 IRF2BP2Q7Z5L9 587 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 SLC35C1Q96A29 364 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 PSMB7Q99436 277 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 ZNF577Q9BSK1 485 aa12.58□□□□□ -0.4
TRAFD1-202ENST00000412615 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms