RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 WDR64B1ANS9 1081 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 BTBD18B2RXH4 712 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 HBP1O60381 514 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 PSMD10O75832 226 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 BAIAP3O94812 1187 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 ATP2A2P16615 1042 aaKnown RBP21.29■■□□□ 1
TRIM56-202ENST00000412507 RABGGTBP53611 331 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 ETNPPLQ8TBG4 499 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 ATP8B4Q8TF62 1192 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 DNAJB3Q8WWF6 145 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 DISC1Q9NRI5 854 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 MAFBQ9Y5Q3 323 aaPredicted RBP21.29■■□□□ 1
TRIM56-202ENST00000412507 GTF3C3Q9Y5Q9 886 aa21.29■■□□□ 1
TRIM56-202ENST00000412507 ST18O60284 1047 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 CCNT1O60563 726 aaKnown RBP21.28■■□□□ 1
TRIM56-202ENST00000412507 GUCY1B3Q02153 619 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 FAM26DQ5JW98 314 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 TRMT1LQ7Z2T5 733 aaKnown RBP21.28■■□□□ 1
TRIM56-202ENST00000412507 CKAP2LQ8IYA6 745 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 DIS3L2Q8IYB7 885 aaKnown RBP21.28■■□□□ 1
TRIM56-202ENST00000412507 TIFAQ96CG3 184 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 TBC1D32Q96NH3 1257 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 FAM49AQ9H0Q0 323 aaPredicted RBP21.28■■□□□ 1
TRIM56-202ENST00000412507 MSRAQ9UJ68 235 aa21.28■■□□□ 1
TRIM56-202ENST00000412507 TMEM265A0A087WTH1 108 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 CHRNA1P02708 482 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 GCFC2P16383 781 aaKnown RBP21.27■■□□□ 1
TRIM56-202ENST00000412507 SFNP31947 248 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 KCNJ6P48051 423 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 JAK3P52333 1124 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 WDR5P61964 334 aaKnown RBP21.27■■□□□ 1
TRIM56-202ENST00000412507 RAB30Q15771 203 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 PPP4R3AQ6IN85 833 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 MTHFD1LQ6UB35 978 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 MIER3Q7Z3K6 550 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 RPAINQ86UA6 219 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 RSPH3Q86UC2 560 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 DBF4BQ8NFT6 615 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 GUCD1Q96NT3 240 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 SLC9A7Q96T83 725 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 NKX2-4Q9H2Z4 354 aa21.27■■□□□ 1
TRIM56-202ENST00000412507 YBX2Q9Y2T7 364 aaKnown RBP21.27■■□□□ 1
TRIM56-202ENST00000412507 IGSF9BQ9UPX0 1349 aa21.27■□□□□ 0.99
TRIM56-202ENST00000412507 COL1A2P08123 1366 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 MGAT3Q09327 533 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 IKBKEQ14164 716 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 PLEKHG4Q58EX7 1191 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 ZNF484Q5JVG2 852 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 BBXQ8WY36 941 aaPredicted RBP21.26■□□□□ 0.99
TRIM56-202ENST00000412507 C8orf76Q96K31 380 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 NAP1L4Q99733 375 aaKnown RBP21.26■□□□□ 0.99
TRIM56-202ENST00000412507 PCDHA2Q9Y5H9 948 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 ARID2Q68CP9 1835 aa21.26■□□□□ 0.99
TRIM56-202ENST00000412507 ABHD14A-ACY1A0A1B0GW23 586 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 ZBTB42B2RXF5 422 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 CD2BP2O95400 341 aaKnown RBP21.25■□□□□ 0.99
TRIM56-202ENST00000412507 MYOGP15173 224 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 KLRC1P26715 233 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 DEFB103AP81534 67 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 HMGN5P82970 282 aaKnown RBP21.25■□□□□ 0.99
TRIM56-202ENST00000412507 UGCGQ16739 394 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 B3GNT9Q6UX72 402 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 POTEDQ86YR6 584 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 PHOSPHO2Q8TCD6 241 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 ZNF576Q9H609 170 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 KCNMB3Q9NPA1 279 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 CDY2AQ9Y6F7 541 aa21.25■□□□□ 0.99
TRIM56-202ENST00000412507 ZNF862O60290 1169 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 MRPS6P82932 125 aaKnown RBP21.24■□□□□ 0.99
TRIM56-202ENST00000412507 TMEM62Q0P6H9 643 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 TMCO2Q7Z6W1 182 aaPredicted RBP21.24■□□□□ 0.99
TRIM56-202ENST00000412507 HERC6Q8IVU3 1022 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 FAM184AQ8NB25 1140 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 RDM1Q8NG50 284 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 SEPT8Q92599 483 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 FAM20AQ96MK3 541 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 CDX2Q99626 313 aaPredicted RBP21.24■□□□□ 0.99
TRIM56-202ENST00000412507 PCDHA11Q9Y5I1 949 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 NLRC5Q86WI3 1866 aa21.24■□□□□ 0.99
TRIM56-202ENST00000412507 SMIM35A0A1B0GVV1 85 aa21.23■□□□□ 0.99
TRIM56-202ENST00000412507 GHRP10912 638 aa21.23■□□□□ 0.99
TRIM56-202ENST00000412507 PRKCEQ02156 737 aa21.23■□□□□ 0.99
TRIM56-202ENST00000412507 SAFBQ15424 915 aaKnown RBP eCLIP21.23■□□□□ 0.99
TRIM56-202ENST00000412507 HAS1Q92839 578 aa21.23■□□□□ 0.99
TRIM56-202ENST00000412507 FAM167AQ96KS9 214 aa21.23■□□□□ 0.99
TRIM56-202ENST00000412507 WNT7AO00755 349 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 TBX3O15119 743 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 MARCH6O60337 910 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 EFCAB14O75071 495 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 OATP04181 439 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 RPLP2P05387 115 aaKnown RBP21.22■□□□□ 0.99
TRIM56-202ENST00000412507 LPIN1Q14693 890 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 GRIN2CQ14957 1233 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 IER5Q5VY09 327 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.22■□□□□ 0.992e-9■■■■■ 29.3
TRIM56-202ENST00000412507 IL27Q8NEV9 243 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 TMX3Q96JJ7 454 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 BACH2Q9BYV9 841 aa21.22■□□□□ 0.99
TRIM56-202ENST00000412507 IFIH1Q9BYX4 1025 aaKnown RBP21.22■□□□□ 0.99
TRIM56-202ENST00000412507 SLC28A3Q9HAS3 691 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms