RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-206ENST00000412056 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 TMEM266Q2M3C6 531 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 BBXQ8WY36 941 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-206ENST00000412056 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 FAM167AQ96KS9 214 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
CPNE1-206ENST00000412056 WRAP73Q9P2S5 460 aaPredicted RBP15.67■□□□□ 0.1
CPNE1-206ENST00000412056 TET1Q8NFU7 2136 aa15.67■□□□□ 0.1
CPNE1-206ENST00000412056 COL1A2P08123 1366 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 TMEM150BA6NC51 233 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 ZBTB42B2RXF5 422 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 STBD1O95210 358 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 GNAT1P11488 350 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 PDIA4P13667 645 aaKnown RBP15.66■□□□□ 0.1
CPNE1-206ENST00000412056 RAG1P15918 1043 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 CYP2C18P33260 490 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 PRPHP41219 470 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.12e-6■■■□□ 18.4
CPNE1-206ENST00000412056 PSMC5P62195 406 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 MDM2Q00987 491 aaPredicted RBP15.66■□□□□ 0.1
CPNE1-206ENST00000412056 PTK7Q13308 1070 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 CTTNQ14247 550 aaKnown RBP15.66■□□□□ 0.1
CPNE1-206ENST00000412056 SF3A1Q15459 793 aaKnown RBP15.66■□□□□ 0.1
CPNE1-206ENST00000412056 IL17AQ16552 155 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 TRIM71Q2Q1W2 868 aaKnown RBP15.66■□□□□ 0.1
CPNE1-206ENST00000412056 MARCH8Q5T0T0 291 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 RUFY4Q6ZNE9 571 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 SERINC5Q86VE9 423 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 BADQ92934 168 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 LXNQ9BS40 222 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 CLIC4Q9Y696 253 aa15.66■□□□□ 0.1
CPNE1-206ENST00000412056 MBLAC1A4D2B0 266 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-206ENST00000412056 TIMP1P01033 207 aa15.65■□□□□ 0.1
CPNE1-206ENST00000412056 P4HBP07237 508 aaKnown RBP15.65■□□□□ 0.1
CPNE1-206ENST00000412056 MAGEA10P43363 369 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-206ENST00000412056 QARSP47897 775 aaKnown RBP15.65■□□□□ 0.1
CPNE1-206ENST00000412056 USP28Q96RU2 1077 aa15.65■□□□□ 0.1
CPNE1-206ENST00000412056 WNT8AQ9H1J5 351 aa15.65■□□□□ 0.1
CPNE1-206ENST00000412056 SEPT9Q9UHD8 586 aaPredicted RBP15.65■□□□□ 0.1
CPNE1-206ENST00000412056 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
CPNE1-206ENST00000412056 RBAK-RBAKDNI3L0D1 243 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 BMP15O95972 392 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 CCL23P55773 120 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 CEBPZQ03701 1054 aaKnown RBP15.64■□□□□ 0.09
CPNE1-206ENST00000412056 RBL2Q08999 1139 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 PTPAQ15257 358 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 XKR3Q5GH77 459 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 ZNF484Q5JVG2 852 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 PRPF38BQ5VTL8 546 aaKnown RBP15.64■□□□□ 0.09
CPNE1-206ENST00000412056 PLA2G4FQ68DD2 849 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 TPH2Q8IWU9 490 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 CCDC155Q8N6L0 562 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 CAGE1Q8TC20 777 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 NEK9Q8TD19 979 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 TNPO1Q92973 898 aaKnown RBP15.64■□□□□ 0.09
CPNE1-206ENST00000412056 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 LBHD1Q9BQE6 289 aaPredicted RBP15.64■□□□□ 0.09
CPNE1-206ENST00000412056 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
CPNE1-206ENST00000412056 DNAH12Q6ZR08 3092 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 VWA3AA6NCI4 1184 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 DDX11L8A8MPP1 907 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 PP2D1A8MPX8 630 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 PITPNM1O00562 1244 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 DKC1O60832 514 aaKnown RBP eCLIP15.63■□□□□ 0.09
CPNE1-206ENST00000412056 MED24O75448 989 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 SLITRK3O94933 977 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 C22orf31O95567 290 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 BRD1O95696 1058 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 SPATA31C1P0DKV0 1188 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 KLRC1P26715 233 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 ANP32AP39687 249 aaKnown RBP15.63■□□□□ 0.09
CPNE1-206ENST00000412056 BFSP2Q13515 415 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 FOXD4L6Q3SYB3 417 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-206ENST00000412056 MTERF2Q49AM1 385 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 ARL6IP4Q66PJ3 421 aaKnown RBP15.63■□□□□ 0.09
CPNE1-206ENST00000412056 MFSD5Q6N075 450 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 MTHFD1LQ6UB35 978 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 FOXD4L3Q6VB84 417 aaPredicted RBP15.63■□□□□ 0.09
CPNE1-206ENST00000412056 DTHD1Q6ZMT9 781 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 ANO5Q75V66 913 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 C4orf19Q8IY42 314 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 ERMNQ8TAM6 284 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 SCLYQ96I15 445 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 ZSWIM4Q9H7M6 989 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 CEP131Q9UPN4 1083 aa15.63■□□□□ 0.09
CPNE1-206ENST00000412056 CTSHP09668 335 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 CKBP12277 381 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 CSF2RAP15509 400 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 THPOP40225 353 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 GRIN1Q05586 938 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 PDIA5Q14554 519 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 TARBP2Q15633 366 aaKnown RBP15.62■□□□□ 0.09
CPNE1-206ENST00000412056 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 TAF2Q6P1X5 1199 aa15.62■□□□□ 0.09
CPNE1-206ENST00000412056 TRAF7Q6Q0C0 670 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms