RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 ZNF215Q9UL58 517 aaPredicted RBP17.04■□□□□ 0.32
LSM5-207ENST00000410044 CENPFP49454 3210 aa17.04■□□□□ 0.32
LSM5-207ENST00000410044 KAT6AQ92794 2004 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 POTEB3A0JP26 581 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 GOLGA6L4A6NEF3 574 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 KBTBD13C9JR72 458 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 HBP1O60381 514 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 UBE2HP62256 183 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 PLCB4Q15147 1175 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 POTEBQ6S5H4 581 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 TRIM50Q86XT4 487 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 ATP8B4Q8TF62 1192 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 BBXQ8WY36 941 aaPredicted RBP17.03■□□□□ 0.32
LSM5-207ENST00000410044 FAM167AQ96KS9 214 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 PYM1Q9BRP8 204 aaKnown RBP17.03■□□□□ 0.32
LSM5-207ENST00000410044 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 RNPEPQ9H4A4 650 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 ANKEF1Q9NU02 776 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 DBR1Q9UK59 544 aaKnown RBP17.03■□□□□ 0.32
LSM5-207ENST00000410044 KIAA1024Q9UPX6 916 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 LOXHD1Q8IVV2 1947 aa17.03■□□□□ 0.32
LSM5-207ENST00000410044 GADD45BO75293 160 aaPredicted RBP17.02■□□□□ 0.32
LSM5-207ENST00000410044 ZNF286BP0CG31 522 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 MCM4P33991 863 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 PSEN2P49810 448 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
LSM5-207ENST00000410044 CXCL17Q6UXB2 119 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 CCDC73Q6ZRK6 1079 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 OTUD6AQ7L8S5 288 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 MRPS27Q92552 414 aaKnown RBP17.02■□□□□ 0.32
LSM5-207ENST00000410044 DDX19AQ9NUU7 478 aaKnown RBP17.02■□□□□ 0.32
LSM5-207ENST00000410044 KCNH3Q9ULD8 1083 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 PPME1Q9Y570 386 aa17.02■□□□□ 0.32
LSM5-207ENST00000410044 A0A087X0B3 334 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 A0A1B0GVL5 298 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 OATP04181 439 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 PFKFB1P16118 471 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 YWHABP31946 246 aaKnown RBP17.01■□□□□ 0.31
LSM5-207ENST00000410044 PSMC6P62333 389 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 PRKCEQ02156 737 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 MFSD10Q14728 455 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 TARBP2Q15633 366 aaKnown RBP17.01■□□□□ 0.31
LSM5-207ENST00000410044 E2F4Q16254 413 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 KIAA0753Q2KHM9 967 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 NAALADL2Q58DX5 795 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 ANO5Q75V66 913 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 FSIP1Q8NA03 581 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 SLC43A3Q8NBI5 491 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 ENGASEQ8NFI3 743 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 CDK5RAP3Q96JB5 506 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 CEP89Q96ST8 783 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 CUEDC2Q9H467 287 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 STK17AQ9UEE5 414 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 USP25Q9UHP3 1055 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 DNM3Q9UQ16 869 aa17.01■□□□□ 0.31
LSM5-207ENST00000410044 KIAA0100Q14667 2235 aaKnown RBP17.01■□□□□ 0.31
LSM5-207ENST00000410044 GRIN2DO15399 1336 aa17■□□□□ 0.31
LSM5-207ENST00000410044 DDX11L8A8MPP1 907 aa17■□□□□ 0.31
LSM5-207ENST00000410044 ZBTB39O15060 712 aa17■□□□□ 0.31
LSM5-207ENST00000410044 EYA4O95677 639 aa17■□□□□ 0.31
LSM5-207ENST00000410044 COL6A1P12109 1028 aa17■□□□□ 0.31
LSM5-207ENST00000410044 PLCG1P19174 1290 aa17■□□□□ 0.31
LSM5-207ENST00000410044 HOXC8P31273 242 aa17■□□□□ 0.31
LSM5-207ENST00000410044 NDUFA8P51970 172 aa17■□□□□ 0.31
LSM5-207ENST00000410044 ADAM17P78536 824 aa17■□□□□ 0.31
LSM5-207ENST00000410044 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
LSM5-207ENST00000410044 ZNF484Q5JVG2 852 aa17■□□□□ 0.31
LSM5-207ENST00000410044 RRAGBQ5VZM2 374 aa17■□□□□ 0.31
LSM5-207ENST00000410044 NFRKBQ6P4R8 1299 aa17■□□□□ 0.31
LSM5-207ENST00000410044 KCNK18Q7Z418 384 aa17■□□□□ 0.31
LSM5-207ENST00000410044 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
LSM5-207ENST00000410044 IQUBQ8NA54 791 aa17■□□□□ 0.31
LSM5-207ENST00000410044 LRRC15Q8TF66 581 aa17■□□□□ 0.31
LSM5-207ENST00000410044 GOLPH3LQ9H4A5 285 aa17■□□□□ 0.31
LSM5-207ENST00000410044 BLOC1S4Q9NUP1 217 aa17■□□□□ 0.31
LSM5-207ENST00000410044 COL1A2P08123 1366 aa17■□□□□ 0.31
LSM5-207ENST00000410044 A0A1W2PQ45 241 aaPredicted RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 A0A1W2PQY0 241 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 RRN3P2A6NIE6 340 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 E9PMD0 336 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 POLR2DO15514 142 aaKnown RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 MARK3P27448 753 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 SYKP43405 635 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 RARRES1P49788 294 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 SNW1Q13573 536 aaKnown RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 NBPF20Q3BBV1 942 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 SYT2Q8N9I0 419 aaPredicted RBP16.99■□□□□ 0.31
LSM5-207ENST00000410044 PIGOQ8TEQ8 1089 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 PANK2Q9BZ23 570 aa16.99■□□□□ 0.31
LSM5-207ENST00000410044 NRCAMQ92823 1304 aa16.98■□□□□ 0.31
LSM5-207ENST00000410044 ZBTB42B2RXF5 422 aa16.98■□□□□ 0.31
LSM5-207ENST00000410044 ZNF202O95125 648 aa16.98■□□□□ 0.31
LSM5-207ENST00000410044 SMIM10L2AP0DMW4 78 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms