RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 CCSER1Q9C0I3 900 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 SENP6Q9GZR1 1112 aaPredicted RBP23.09■■□□□ 1.29
C4orf48-202ENST00000409860 C11orf49Q9H6J7 331 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 NRBP2Q9NSY0 501 aa23.09■■□□□ 1.29
C4orf48-202ENST00000409860 POTEB3A0JP26 581 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 GOLGA6L4A6NEF3 574 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 SOX10P56693 466 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 ITGA7Q13683 1181 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 XKR3Q5GH77 459 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 POTEBQ6S5H4 581 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 NECAB2Q7Z6G3 386 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 C7orf31Q8N865 590 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 BBXQ8WY36 941 aaPredicted RBP23.08■■□□□ 1.29
C4orf48-202ENST00000409860 PAWRQ96IZ0 340 aaKnown RBP23.08■■□□□ 1.29
C4orf48-202ENST00000409860 EPSTI1Q96J88 318 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 SEZ6LQ9BYH1 1024 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 NT5C3AQ9H0P0 336 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 RNPEPQ9H4A4 650 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 FAM13BQ9NYF5 915 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 CCDC39Q9UFE4 941 aa23.08■■□□□ 1.29
C4orf48-202ENST00000409860 HBP1O60381 514 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 COL6A1P12109 1028 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 ATP4AP20648 1035 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 NBPF20Q3BBV1 942 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 HYIQ5T013 277 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 NFRKBQ6P4R8 1299 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 POTEGQ6S5H5 508 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 SHC4Q6S5L8 630 aa23.07■■□□□ 1.28
C4orf48-202ENST00000409860 TRMT1LQ7Z2T5 733 aaKnown RBP23.07■■□□□ 1.28
C4orf48-202ENST00000409860 WRAP73Q9P2S5 460 aaPredicted RBP23.07■■□□□ 1.28
C4orf48-202ENST00000409860 SEPT9Q9UHD8 586 aaPredicted RBP23.07■■□□□ 1.28
C4orf48-202ENST00000409860 A0A1W2PQ27 194 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 A0A1W2PQ64 194 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 A0A1W2PQD8 194 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 DDX11L8A8MPP1 907 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 SMIM10L2AP0DMW4 78 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 SMIM10L2BP0DMW5 78 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 YWHABP31946 246 aaKnown RBP23.06■■□□□ 1.28
C4orf48-202ENST00000409860 PPFIA1Q13136 1202 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 FAM47CQ5HY64 1035 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 RESP18Q5W5W9 173 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 USP49Q70CQ1 688 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 OTUD6AQ7L8S5 288 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 KCTD17Q8N5Z5 321 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 TMEM87AQ8NBN3 555 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 CCDC43Q96MW1 224 aaKnown RBP23.06■■□□□ 1.28
C4orf48-202ENST00000409860 NACC1Q96RE7 527 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 DDX19AQ9NUU7 478 aaKnown RBP23.06■■□□□ 1.28
C4orf48-202ENST00000409860 KIAA1024Q9UPX6 916 aa23.06■■□□□ 1.28
C4orf48-202ENST00000409860 CMA1P23946 247 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 PTPN11Q06124 597 aaPredicted RBP23.05■■□□□ 1.28
C4orf48-202ENST00000409860 GRB10Q13322 594 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 KARSQ15046 597 aaKnown RBP23.05■■□□□ 1.28
C4orf48-202ENST00000409860 ECM1Q16610 540 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 TMEM119Q4V9L6 283 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 SESTD1Q86VW0 696 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 PNMA5Q96PV4 448 aa23.05■■□□□ 1.28
C4orf48-202ENST00000409860 ARVCFO00192 962 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 STBD1O95210 358 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.28
C4orf48-202ENST00000409860 TPRNQ4KMQ1 711 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 ZNF484Q5JVG2 852 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 NIFKQ9BYG3 293 aaKnown RBP23.04■■□□□ 1.28
C4orf48-202ENST00000409860 ANKEF1Q9NU02 776 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 HDAC6Q9UBN7 1215 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 DNM3Q9UQ16 869 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 GRIN2DO15399 1336 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 NRCAMQ92823 1304 aa23.04■■□□□ 1.28
C4orf48-202ENST00000409860 SCN10AQ9Y5Y9 1956 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 COL1A2P08123 1366 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 C17orf102A2RUQ5 167 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 RRN3P2A6NIE6 340 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 GOLGA6L22H0YM25 854 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 GNAT1P11488 350 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 INSRRP14616 1297 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 PLCG1P19174 1290 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 ATN1P54259 1190 aaPredicted RBP23.03■■□□□ 1.28
C4orf48-202ENST00000409860 GRIK4Q16099 956 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 SLC39A5Q6ZMH5 540 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 CCDC73Q6ZRK6 1079 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 ANO5Q75V66 913 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 UBE2Q1Q7Z7E8 422 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 SLC43A3Q8NBI5 491 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 PIGOQ8TEQ8 1089 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 MRPS27Q92552 414 aaKnown RBP23.03■■□□□ 1.28
C4orf48-202ENST00000409860 PLIN2Q99541 437 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 GTF2IRD1Q9UHL9 959 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 PPME1Q9Y570 386 aa23.03■■□□□ 1.28
C4orf48-202ENST00000409860 IGBP1P78318 339 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 MTERF2Q49AM1 385 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 XKR9Q5GH70 373 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 RRAGBQ5VZM2 374 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 PLA2G4FQ68DD2 849 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 FSIP1Q8NA03 581 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 PPP1R13LQ8WUF5 828 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 CEP170P1Q96L14 293 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 PYM1Q9BRP8 204 aaKnown RBP23.02■■□□□ 1.28
C4orf48-202ENST00000409860 SETD4Q9NVD3 440 aa23.02■■□□□ 1.28
C4orf48-202ENST00000409860 DBR1Q9UK59 544 aaKnown RBP23.02■■□□□ 1.28
C4orf48-202ENST00000409860 MROH7Q68CQ1 1323 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms