RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 SPATA1Q5VX52 437 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 C1orf186Q6ZWK4 172 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 SFR1Q86XK3 245 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 CREBRFQ8IUR6 639 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 SPC24Q8NBT2 197 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF784Q8NCA9 323 aaPredicted RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 RDM1Q8NG50 284 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 COPS5Q92905 334 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 HHIPL1Q96JK4 782 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 PPP1R9BQ96SB3 815 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
CHMP3-204ENST00000409727 PLXNA1Q9UIW2 1896 aa13.83□□□□□ -0.2
CHMP3-204ENST00000409727 USO1O60763 962 aaKnown RBP13.82□□□□□ -0.2
CHMP3-204ENST00000409727 SUPT20HL2P0C7V6 817 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 TGFB3P10600 412 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 TM4SF4P48230 202 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 RARRES1P49788 294 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF75DP51815 510 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 NPEPPSP55786 919 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 EHHADHQ08426 723 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 CT47A1Q5JQC4 288 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-204ENST00000409727 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 ABHD15Q6UXT9 468 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 C4orf19Q8IY42 314 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 NPLOC4Q8TAT6 608 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 MORC4Q8TE76 937 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 ATP6V0A1Q93050 837 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 EEF2KMTQ96G04 330 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 MAML3Q96JK9 1138 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 PDLIM2Q96JY6 352 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 SLC15A5A6NIM6 579 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF862O60290 1169 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 FAM13AO94988 1023 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 SERPINC1P01008 464 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 TXNP10599 105 aaKnown RBP13.82□□□□□ -0.2
CHMP3-204ENST00000409727 PSMD2Q13200 908 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 DEFB115Q30KQ5 88 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 XKR9Q5GH70 373 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 DRC7Q8IY82 874 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.82□□□□□ -0.2
CHMP3-204ENST00000409727 IFNKQ9P0W0 207 aa13.82□□□□□ -0.2
CHMP3-204ENST00000409727 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 FRMD3A2A2Y4 597 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 NOP56O00567 594 aaKnown RBP13.81□□□□□ -0.2
CHMP3-204ENST00000409727 LYPLA2O95372 231 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 FANCCQ00597 558 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 PRKCEQ02156 737 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 TTLL4Q14679 1199 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-204ENST00000409727 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 METTL7BQ6UX53 244 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 ANO5Q75V66 913 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 NELFCDQ8IXH7 590 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 P2RX5Q93086 422 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 DHTKD1Q96HY7 919 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-204ENST00000409727 CAPNS2Q96L46 248 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF302Q9NR11 478 aa13.81□□□□□ -0.2
CHMP3-204ENST00000409727 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
CHMP3-204ENST00000409727 DBR1Q9UK59 544 aaKnown RBP13.81□□□□□ -0.2
CHMP3-204ENST00000409727 GSTTP1A0A1W2PQM5 241 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 HIP1RO75146 1068 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 PTMAP06454 111 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 TCF7P36402 384 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 CASP5P51878 434 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 HSDL1Q3SXM5 330 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 CELF3Q5SZQ8 465 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 ANKRD40Q6AI12 368 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 KCNV1Q6PIU1 500 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 SCFD2Q8WU76 684 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 CEP170P1Q96L14 293 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 GTPBP4Q9BZE4 634 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 LOC102724159A0A0B4J2E5 919 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 CA12O43570 354 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 SNAI1O95863 264 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF18P17022 549 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 ADCYAP1R1P41586 468 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 NOGQ13253 232 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 PWP2Q15269 919 aaKnown RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 MORN1Q5T089 497 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 TAPT1Q6NXT6 567 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 ZNF467Q7Z7K2 595 aaPredicted RBP13.8□□□□□ -0.2
CHMP3-204ENST00000409727 TINF2Q9BSI4 451 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 SEMA6BQ9H3T3 888 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 SLC5A4Q9NY91 659 aa13.8□□□□□ -0.2
CHMP3-204ENST00000409727 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.79□□□□□ -0.2
CHMP3-204ENST00000409727 DKC1O60832 514 aaKnown RBP eCLIP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms