RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 MBLAC1A4D2B0 266 aaPredicted RBP14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 EYA4O95677 639 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 KCNA2P16389 499 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 CD52P31358 61 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PTH1RQ03431 593 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PPFIA1Q13136 1202 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 POP1Q99575 1024 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 LOXHD1Q8IVV2 1947 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 GLP2RO95838 553 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 NDUFV1P49821 464 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 IGBP1P78318 339 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 RBM10P98175 930 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 TRAF1Q13077 416 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PAN2Q504Q3 1202 aaKnown RBP14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 TAF2Q6P1X5 1199 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 TSHZ1Q6ZSZ6 1077 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 KLHL23Q8NBE8 558 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 SMARCC2Q8TAQ2 1214 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PCYT2Q99447 389 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PLVAPQ9BX97 442 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PKD2L1Q9P0L9 805 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 TUBE1Q9UJT0 475 aa14.5□□□□□ -0.09
CHRNA1-205ENST00000409542 PLXNA4Q9HCM2 1894 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 TMEM221A6NGB7 291 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 LOC730098B7Z3J9 87 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 M0R296 226 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 ITGB5P18084 799 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 ANTXR2P58335 489 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 MRPS6P82932 125 aaKnown RBP14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 WTAPQ15007 396 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 TRIM67Q6ZTA4 783 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 BMP8AQ7Z5Y6 402 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 RBM23Q86U06 439 aaKnown RBP14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 POF1BQ8WVV4 589 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 SEPT1Q8WYJ6 367 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 P2RX5Q93086 422 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 MYL10Q9BUA6 226 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 BARX2Q9UMQ3 279 aaPredicted RBP14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 LIMCH1Q9UPQ0 1083 aa14.49□□□□□ -0.09
CHRNA1-205ENST00000409542 NRIP1P48552 1158 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 ZNF445P59923 1031 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 TMEM62Q0P6H9 643 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 TCF15Q12870 199 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 NECTIN1Q15223 517 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 NLRX1Q86UT6 975 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 CMTR2Q8IYT2 770 aaKnown RBP14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 EFHBQ8N7U6 833 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 SMRP1Q8NCR6 262 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 PBXIP1Q96AQ6 731 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 FAM49AQ9H0Q0 323 aaPredicted RBP14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 ZSWIM6Q9HCJ5 1215 aa14.48□□□□□ -0.09
CHRNA1-205ENST00000409542 E7EWF7 191 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 PIK3CDO00329 1044 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 PPFIA3O75145 1194 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 INSRRP14616 1297 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 AK2P54819 239 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 ZXDAP98168 799 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 COASYQ13057 564 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 TRDNQ13061 729 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 COL9A3Q14050 684 aaPredicted RBP14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 RSPH3Q86UC2 560 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 NPAS4Q8IUM7 802 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 CMTR1Q8N1G2 835 aaKnown RBP14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 TRAPPC12Q8WVT3 735 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 GLG1Q92896 1179 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 MAP4K1Q92918 833 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 GPRASP2Q96D09 838 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 TMX1Q9H3N1 280 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 ERAP1Q9NZ08 941 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 PADI3Q9ULW8 664 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 USP15Q9Y4E8 981 aaPredicted RBP14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 UBIAD1Q9Y5Z9 338 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 CFAP54Q96N23 3096 aa14.47□□□□□ -0.09
CHRNA1-205ENST00000409542 PER2O15055 1255 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 PLEKHA8P1O95397 391 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 CBX2Q14781 532 aaPredicted RBP14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 UBE2SQ16763 222 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 XRRA1Q6P2D8 792 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 RUFY3Q7L099 469 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 GAS2L3Q86XJ1 694 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 GIMAP8Q8ND71 665 aaPredicted RBP14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 VN1R2Q8NFZ6 395 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 CUL5Q93034 780 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 ZSCAN31Q96LW9 406 aaPredicted RBP14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 SPZ1Q9BXG8 430 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 SMARCAD1Q9H4L7 1026 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 HCSTQ9UBK5 93 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 RBM8AQ9Y5S9 174 aaKnown RBP14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 KMT2EQ8IZD2 1858 aa14.46□□□□□ -0.09
CHRNA1-205ENST00000409542 ERICH2A1L162 156 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 MGEA5O60502 916 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 MBD3O95983 291 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 IBSPP21815 317 aaPredicted RBP14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 TMEM266Q2M3C6 531 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 NAALADL2Q58DX5 795 aa14.45□□□□□ -0.1
CHRNA1-205ENST00000409542 CATIPQ7Z7H3 387 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms