RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 LMAN2LQ9H0V9 348 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 IGFLR1Q9H665 355 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 KAT14Q9H8E8 782 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 FAM86C1Q9NVL1 165 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 MRPL11Q9Y3B7 192 aaKnown RBP7.16□□□□□ -1.26
RPA3-204ENST00000406109 ADGRA3Q8IWK6 1321 aa7.16□□□□□ -1.26
RPA3-204ENST00000406109 GFRA3O60609 400 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 DGKIO75912 1065 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 REC8O95072 547 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 ITGB1P05556 798 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 HOXA13P31271 388 aaPredicted RBP7.15□□□□□ -1.26
RPA3-204ENST00000406109 MRPS9P82933 396 aaKnown RBP7.15□□□□□ -1.26
RPA3-204ENST00000406109 MGAT3Q09327 533 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 LPIN1Q14693 890 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 PKN1Q16512 942 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 IFIT1BQ5T764 474 aaKnown RBP7.15□□□□□ -1.26
RPA3-204ENST00000406109 KCNV1Q6PIU1 500 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 RUFY4Q6ZNE9 571 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 RTN4RL1Q86UN2 441 aaPredicted RBP7.15□□□□□ -1.26
RPA3-204ENST00000406109 TRIM50Q86XT4 487 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 EFHBQ8N7U6 833 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 ENAHQ8N8S7 591 aaPredicted RBP7.15□□□□□ -1.26
RPA3-204ENST00000406109 VN1R2Q8NFZ6 395 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 LMBR1Q8WVP7 490 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 LINC01599Q8WXQ3 324 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 SUSD6Q92537 303 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 GPR20Q99678 358 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 PRRX2Q99811 253 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 USP26Q9BXU7 913 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 VAT1LQ9HCJ6 419 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 PCDHGC5Q9Y5F6 944 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 GTF3C3Q9Y5Q9 886 aa7.15□□□□□ -1.26
RPA3-204ENST00000406109 PLXNA4Q9HCM2 1894 aa7.15□□□□□ -1.27
RPA3-204ENST00000406109 PROB1E7EW31 1015 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 LAMA5O15230 3695 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 PRC1O43663 620 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 CSPG5O95196 566 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 PDGFBP01127 241 aaPredicted RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 GHRP10912 638 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 AVPR2P30518 371 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 ICAM3P32942 547 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 MCM5P33992 734 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 RBM10P98175 930 aaKnown RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 SIGLEC14Q08ET2 396 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 WTAPQ15007 396 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 SART3Q15020 963 aaKnown RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 ASPRV1Q53RT3 343 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 FBXO47Q5MNV8 452 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 METTL7BQ6UX53 244 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 CYFIP1Q7L576 1253 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 P2RX5Q93086 422 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 INPP4AQ96PE3 977 aaPredicted RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 NEK1Q96PY6 1258 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 AMNQ9BXJ7 453 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 AGO3Q9H9G7 860 aaKnown RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 MLXIPQ9HAP2 919 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 MAP3K20Q9NYL2 800 aaKnown RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 BARX2Q9UMQ3 279 aaPredicted RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 RWDD3Q9Y3V2 267 aa7.14□□□□□ -1.27
RPA3-204ENST00000406109 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 MRPL42Q9Y6G3 142 aaKnown RBP7.14□□□□□ -1.27
RPA3-204ENST00000406109 FNDC1Q4ZHG4 1894 aaPredicted RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 LAMA4Q16363 1823 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 FRMPD4Q14CM0 1322 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 SPATA31C2B4DYI2 1134 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 ZBTB5O15062 677 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 PARP1P09874 1014 aaKnown RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 GNAT1P11488 350 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 CCND2P30279 289 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 HSPA4P34932 840 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 NRIP1P48552 1158 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 NDUFV1P49821 464 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 ARHGAP4P98171 946 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 FOXK2Q01167 660 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 KCNC3Q14003 757 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 BTG3Q14201 252 aaPredicted RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 KRT32Q14532 448 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 SEC23AQ15436 765 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 NAALADL2Q58DX5 795 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 MARCH8Q5T0T0 291 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 NFXL1Q6ZNB6 911 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 ASCL5Q7RTU5 278 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 RBM23Q86U06 439 aaKnown RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 SUGP1Q8IWZ8 645 aaKnown RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 MB21D2Q8IYB1 491 aaPredicted RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 KLHL23Q8NBE8 558 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 IGDCC4Q8TDY8 1250 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 ATP8B4Q8TF62 1192 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 PHF7Q9BWX1 381 aaPredicted RBP7.13□□□□□ -1.27
RPA3-204ENST00000406109 SENP2Q9HC62 589 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 MAD2L2Q9UI95 211 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 PCDHA1Q9Y5I3 950 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 SPEGQ15772 3267 aa7.13□□□□□ -1.27
RPA3-204ENST00000406109 MAP1BP46821 2468 aaKnown RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 NRCAMQ92823 1304 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 MBLAC1A4D2B0 266 aaPredicted RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 PALM3A6NDB9 673 aaPredicted RBP7.12□□□□□ -1.27
RPA3-204ENST00000406109 CCDC69A6NI79 296 aa7.12□□□□□ -1.27
RPA3-204ENST00000406109 H0Y858 1186 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms