RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 GGA2Q9UJY4 613 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 C15orf41Q9Y2V0 281 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 TRAPPC3O43617 180 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 GSTA1P08263 222 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 CYP2J2P51589 502 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 GSCP56915 257 aaPredicted RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 KCNH2Q12809 1159 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 MYCT1Q8N699 235 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SPDYE1Q8NFV5 336 aaPredicted RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 CALR3Q96L12 384 aaKnown RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 LRRC37BQ96QE4 947 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8□□□□□ -1.13
HDAC9-202ENST00000405010 TFCP2L1Q9NZI6 479 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 DLG5Q8TDM6 1919 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 ANKRD26Q9UPS8 1709 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 FAM187AA6NFU0 413 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 ORC4O43929 436 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 GHRP10912 638 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
HDAC9-202ENST00000405010 USP11P51784 963 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 CFAP157Q5JU67 520 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 KLHDC7AQ5VTJ3 777 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 SH3RF1Q7Z6J0 888 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 NLRP10Q86W26 655 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 LONP2Q86WA8 852 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 ATP8A2Q9NTI2 1148 aa8□□□□□ -1.13
HDAC9-202ENST00000405010 OPLAHO14841 1288 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 MAP3K7O43318 606 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 LRRN2O75325 713 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 DCTN3O75935 186 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 FGFR4P22455 802 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 TNIP1Q15025 636 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 FAM129AQ9BZQ8 928 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 DDX25Q9UHL0 483 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 INTUQ9ULD6 942 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 A0A087X0T9 212 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CYP27B1O15528 508 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 UBOX5O94941 541 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 SNUPNO95149 360 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 FAM228BP0C875 321 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 KRT5P13647 590 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 MRPS35P82673 323 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CHRNDQ07001 517 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 ZNF844Q08AG5 666 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 ITGB3BPQ13352 177 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 SGO2Q562F6 1265 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 MAPKAPK5Q8IW41 473 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 IQCKQ8N0W5 287 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 GRK7Q8WTQ7 553 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 TBC1D22AQ8WUA7 517 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 TMEM60Q9H2L4 133 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 SH3GLB2Q9NR46 395 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 JCADQ9P266 1359 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 ATXN2Q99700 1313 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 POTEMA6NI47 508 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CAND2O75155 1236 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CA4P22748 312 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CDC25CP30307 473 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 ELF3P78545 371 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 PICALMQ13492 652 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 EARS2Q5JPH6 523 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 RNF168Q8IYW5 571 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 SPATA20Q8TB22 786 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 RPGRQ92834 1020 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 FGD4Q96M96 766 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 NLRP3Q96P20 1036 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 EYA3Q99504 573 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 DBR1Q9UK59 544 aaKnown RBP7.99□□□□□ -1.13
HDAC9-202ENST00000405010 AXIN2Q9Y2T1 843 aa7.99□□□□□ -1.13
HDAC9-202ENST00000405010 CLIC2O15247 247 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 CREB3O43889 395 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 IFNB1P01574 187 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 LMNAP02545 664 aaKnown RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 COPS2P61201 443 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 ERVK-9P63128 1117 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 RNASELQ05823 741 aaKnown RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 DYNC1I2Q13409 638 aaKnown RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 CUL3Q13618 768 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 TRIP13Q15645 432 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 PARP10Q53GL7 1025 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 KIAA1755Q5JYT7 1200 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 METTL13Q8N6R0 699 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 TGFBRAP1Q8WUH2 860 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 TEKT4Q8WW24 435 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 KIFAP3Q92845 792 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 GDF3Q9NR23 364 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 ZFATQ9P243 1243 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 ANAPC5Q9UJX4 755 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 DIS3Q9Y2L1 958 aaKnown RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 SYNGAP1Q96PV0 1343 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 HOXA7P31268 230 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 RBM5P52756 815 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 PABPC4Q13310 644 aaKnown RBP eCLIP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 SLC29A2Q14542 456 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 ITIH4Q14624 930 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 PDCD2Q16342 344 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-202ENST00000405010 TMEM154Q6P9G4 183 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 USP37Q86T82 979 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 TATDN2Q93075 761 aa7.98□□□□□ -1.13
HDAC9-202ENST00000405010 DDX27Q96GQ7 796 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms