RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 LXNQ9BS40 222 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 ZSWIM4Q9H7M6 989 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 SAMM50Q9Y512 469 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 SYNRGQ9UMZ2 1314 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 LOXHD1Q8IVV2 1947 aa23.37■■□□□ 1.33
TPM1-208ENST00000404484 ZNFX1Q9P2E3 1918 aaKnown RBP23.37■■□□□ 1.33
TPM1-208ENST00000404484 RGS20O76081 388 aa23.36■■□□□ 1.33
TPM1-208ENST00000404484 KRT18P05783 430 aaKnown RBP23.36■■□□□ 1.33
TPM1-208ENST00000404484 PRKAR2AP13861 404 aaKnown RBP23.36■■□□□ 1.33
TPM1-208ENST00000404484 KCNA2P16389 499 aa23.36■■□□□ 1.33
TPM1-208ENST00000404484 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
TPM1-208ENST00000404484 DYMQ7RTS9 669 aa23.36■■□□□ 1.33
TPM1-208ENST00000404484 PAK6Q9NQU5 681 aaPredicted RBP23.36■■□□□ 1.33
TPM1-208ENST00000404484 ASTN1O14525 1302 aa23.36■■□□□ 1.33
TPM1-208ENST00000404484 ATP9AO75110 1047 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 CYP11B2P19099 503 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 PAK1Q13153 545 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 TRIM5Q9C035 493 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 HMX1Q9NP08 348 aaPredicted RBP23.35■■□□□ 1.33
TPM1-208ENST00000404484 SLC5A4Q9NY91 659 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 RWDD2AQ9UIY3 292 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 KIAA1217Q5T5P2 1943 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 PSMA7O14818 248 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 DKC1O60832 514 aaKnown RBP eCLIP23.35■■□□□ 1.33
TPM1-208ENST00000404484 IDEP14735 1019 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 CD44P16070 742 aaKnown RBP23.35■■□□□ 1.33
TPM1-208ENST00000404484 CYP2C19P33261 490 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 QARSP47897 775 aaKnown RBP23.35■■□□□ 1.33
TPM1-208ENST00000404484 GJA8P48165 433 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 KLHL10Q6JEL2 608 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 KCNV1Q6PIU1 500 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 SMYD4Q8IYR2 804 aaPredicted RBP23.35■■□□□ 1.33
TPM1-208ENST00000404484 ADSSL1Q8N142 457 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 DNAJC19Q96DA6 116 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 BHMT2Q9H2M3 363 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 JPH1Q9HDC5 661 aaPredicted RBP23.35■■□□□ 1.33
TPM1-208ENST00000404484 KCND2Q9NZV8 630 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 GDAQ9Y2T3 454 aa23.35■■□□□ 1.33
TPM1-208ENST00000404484 ASB14A6NK59 587 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 LYPLA2O95372 231 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 TGFB3P10600 412 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 PSMC6P62333 389 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 ZNF792Q3KQV3 632 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 SPATA1Q5VX52 437 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 MFSD14CQ5VZR4 134 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 U2AF1L4Q8WU68 220 aaKnown RBP23.34■■□□□ 1.33
TPM1-208ENST00000404484 DHTKD1Q96HY7 919 aaPredicted RBP23.34■■□□□ 1.33
TPM1-208ENST00000404484 MAML3Q96JK9 1138 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 DEFB118Q96PH6 123 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.34■■□□□ 1.33
TPM1-208ENST00000404484 CTNND2Q9UQB3 1225 aa23.34■■□□□ 1.33
TPM1-208ENST00000404484 SGPL1O95470 568 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 PRCPP42785 496 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 MLLT1Q03111 559 aaPredicted RBP23.33■■□□□ 1.33
TPM1-208ENST00000404484 PANK4Q9NVE7 773 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 SLC9A2Q9UBY0 812 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 NFE2L3Q9Y4A8 694 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 PCDHA10Q9Y5I2 948 aa23.33■■□□□ 1.33
TPM1-208ENST00000404484 CCND3P30281 292 aaPredicted RBP23.32■■□□□ 1.32
TPM1-208ENST00000404484 ZNF75DP51815 510 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 PSMC5P62195 406 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.32■■□□□ 1.32
TPM1-208ENST00000404484 BANK1Q8NDB2 785 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 MORC4Q8TE76 937 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 NELFBQ8WX92 580 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 DIS3Q9Y2L1 958 aaKnown RBP23.32■■□□□ 1.32
TPM1-208ENST00000404484 ZNF236Q9UL36 1845 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 LRRC37A2A6NM11 1700 aa23.32■■□□□ 1.32
TPM1-208ENST00000404484 FRMD3A2A2Y4 597 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 AP5Z1O43299 807 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 CCNE2O96020 404 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 EHHADHQ08426 723 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 COASYQ13057 564 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 TPD52L1Q16890 204 aaPredicted RBP23.31■■□□□ 1.32
TPM1-208ENST00000404484 SEPT14Q6ZU15 432 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 C4orf19Q8IY42 314 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 PIGOQ8TEQ8 1089 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 TRIM44Q96DX7 344 aaPredicted RBP23.31■■□□□ 1.32
TPM1-208ENST00000404484 FGD4Q96M96 766 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 DBR1Q9UK59 544 aaKnown RBP23.31■■□□□ 1.32
TPM1-208ENST00000404484 BICDL2A1A5D9 508 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 PSAPP07602 524 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 NEDD9Q14511 834 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 ARSHQ5FYA8 562 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 FAM26FQ5R3K3 315 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 ATP6V0A1Q93050 837 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 MRFAP1L1Q96HT8 127 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 FANCLQ9NW38 375 aa23.31■■□□□ 1.32
TPM1-208ENST00000404484 ARHGEF35A5YM69 484 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 TBCAO75347 108 aaKnown RBP23.3■■□□□ 1.32
TPM1-208ENST00000404484 KIF20AO95235 890 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 CDC25BP30305 580 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 STK4Q13043 487 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 MIS18BP1Q6P0N0 1132 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 ZNF467Q7Z7K2 595 aaPredicted RBP23.3■■□□□ 1.32
TPM1-208ENST00000404484 TRPV1Q8NER1 839 aa23.3■■□□□ 1.32
TPM1-208ENST00000404484 CCDC43Q96MW1 224 aaKnown RBP23.3■■□□□ 1.32
TPM1-208ENST00000404484 CBFA2T2O43439 604 aa23.29■■□□□ 1.32
TPM1-208ENST00000404484 TFRCP02786 760 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms