RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 DUOX1Q9NRD9 1551 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 CAMTA2O94983 1202 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 TNFRSF8P28908 595 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 PRPHP41219 470 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 KCNJ2P63252 427 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 PABPC4Q13310 644 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 ANKRD42Q8N9B4 389 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 RBM46Q8TBY0 533 aaKnown RBP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 NSMCE1Q8WV22 266 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 FAM167BQ9BTA0 163 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 ERVK-5Q9HDB9 667 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 SH3GLB2Q9NR46 395 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 ABCF3Q9NUQ8 709 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 HDAC9Q9UKV0 1011 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 TRIM33Q9UPN9 1127 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 UTP11Q9Y3A2 253 aaKnown RBP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 SLIT2O94813 1529 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 POTEFA5A3E0 1075 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 PALM3A6NDB9 673 aaPredicted RBP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 TRIM37O94972 964 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 POTEIP0CG38 1075 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 UCHL3P15374 230 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 USP11P51784 963 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 SNAP25P60880 206 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 UBE4AQ14139 1066 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 SLC29A2Q14542 456 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 TTBK2Q6IQ55 1244 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 POTEGQ6S5H5 508 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 POTEEQ6S8J3 1075 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 CD302Q8IX05 232 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 MREGQ8N565 214 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 CCDC63Q8NA47 563 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 CCDC197Q8NCU1 140 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 TATDN2Q93075 761 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 CHMP6Q96FZ7 201 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 XPO6Q96QU8 1125 aaKnown RBP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 FMO2Q99518 471 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMC1B-202ENST00000404354 RNF14Q9UBS8 474 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 PPP1R9AQ9ULJ8 1098 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 PCDHA12Q9UN75 941 aa10.43□□□□□ -0.74
SMC1B-202ENST00000404354 ZNF804BA4D1E1 1349 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 F8VZ95 297 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 LAD1O00515 517 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 CREB1P16220 341 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 RASA1P20936 1047 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 DRD4P21917 467 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 ELF3P78545 371 aaPredicted RBP10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 PLS1Q14651 629 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 USP17L6PQ6QN14 398 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 YTHDF3Q7Z739 585 aaKnown RBP10.42□□□□□ -0.74
SMC1B-202ENST00000404354 EPS8L3Q8TE67 593 aaKnown RBP10.42□□□□□ -0.74
SMC1B-202ENST00000404354 SCFD2Q8WU76 684 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 SCFD1Q8WVM8 642 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 SEMA4AQ9H3S1 761 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 LRRN2O75325 713 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 PSMC6P62333 389 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 TPCN2Q8NHX9 752 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 FBXO25Q8TCJ0 367 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
SMC1B-202ENST00000404354 CICQ96RK0 1608 aaPredicted RBP10.42□□□□□ -0.74
SMC1B-202ENST00000404354 LDHBP07195 334 aaKnown RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 H2AFZP0C0S5 128 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 KCNJ1P48048 391 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 RPS8P62241 208 aaKnown RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 EXOC3L4Q17RC7 722 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 SEPT14Q6ZU15 432 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 H2AFVQ71UI9 128 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 IRF2BP2Q7Z5L9 587 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 SPICE1Q8N0Z3 855 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 GDAP1Q8TB36 358 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 CCT6BQ92526 530 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 ADAM33Q9BZ11 813 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 INTS9Q9NV88 658 aaKnown RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 DDX25Q9UHL0 483 aaKnown RBP10.41□□□□□ -0.74
SMC1B-202ENST00000404354 AGAP1Q9UPQ3 857 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 PVALEFA0A1B0GWK0 134 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 RSPH10B2B2RC85 870 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 CETN3O15182 167 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 EDIL3O43854 480 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 ATP6V1G2O95670 118 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 RSPH10BP0C881 870 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 GALCP54803 685 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 CUL1Q13616 776 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 TRIM59Q8IWR1 403 aa10.41□□□□□ -0.74
SMC1B-202ENST00000404354 ACTR5Q9H9F9 607 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms