RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 IER5Q5VY09 327 aa15.08■□□□□ 0
SDF4-203ENST00000403997 GALNT17Q6IS24 598 aa15.08■□□□□ 0
SDF4-203ENST00000403997 FAM177A1Q8N128 213 aaPredicted RBP15.08■□□□□ 0
SDF4-203ENST00000403997 APBB2Q92870 758 aa15.08■□□□□ 0
SDF4-203ENST00000403997 SAMM50Q9Y512 469 aa15.08■□□□□ 0
SDF4-203ENST00000403997 INSL6Q9Y581 213 aa15.08■□□□□ 0
SDF4-203ENST00000403997 CHD9Q3L8U1 2897 aa15.07■□□□□ 0
SDF4-203ENST00000403997 EPOPA6NHQ4 379 aa15.07■□□□□ 0
SDF4-203ENST00000403997 M0QZ92 97 aa15.07■□□□□ 0
SDF4-203ENST00000403997 MSH4O15457 936 aa15.07■□□□□ 0
SDF4-203ENST00000403997 DTNBO60941 627 aa15.07■□□□□ 0
SDF4-203ENST00000403997 UPP2O95045 317 aa15.07■□□□□ 0
SDF4-203ENST00000403997 XBP1P17861 261 aa15.07■□□□□ 0
SDF4-203ENST00000403997 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
SDF4-203ENST00000403997 LPIN1Q14693 890 aa15.07■□□□□ 0
SDF4-203ENST00000403997 MTHFD1LQ6UB35 978 aa15.07■□□□□ 0
SDF4-203ENST00000403997 TRMT1LQ7Z2T5 733 aaKnown RBP15.07■□□□□ 0
SDF4-203ENST00000403997 SMAP1Q8IYB5 467 aaPredicted RBP15.07■□□□□ 0
SDF4-203ENST00000403997 MICALL1Q8N3F8 863 aa15.07■□□□□ 0
SDF4-203ENST00000403997 DAGLBQ8NCG7 672 aa15.07■□□□□ 0
SDF4-203ENST00000403997 ATP8B4Q8TF62 1192 aa15.07■□□□□ 0
SDF4-203ENST00000403997 LENG9Q96B70 501 aa15.07■□□□□ 0
SDF4-203ENST00000403997 KCNJ14Q9UNX9 436 aa15.07■□□□□ 0
SDF4-203ENST00000403997 PCDHA10Q9Y5I2 948 aa15.07■□□□□ 0
SDF4-203ENST00000403997 CHD7Q9P2D1 2997 aa15.06■□□□□ 0
SDF4-203ENST00000403997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.06■□□□□ 0
SDF4-203ENST00000403997 M0R2N6 131 aa15.06■□□□□ 0
SDF4-203ENST00000403997 GTPBP6O43824 516 aaPredicted RBP15.06■□□□□ 0
SDF4-203ENST00000403997 SEC24BO95487 1268 aa15.06■□□□□ 0
SDF4-203ENST00000403997 ATP4AP20648 1035 aa15.06■□□□□ 0
SDF4-203ENST00000403997 NEK4P51957 841 aa15.06■□□□□ 0
SDF4-203ENST00000403997 TMEM62Q0P6H9 643 aa15.06■□□□□ 0
SDF4-203ENST00000403997 NONOQ15233 471 aaKnown RBP eCLIP15.06■□□□□ 01e-7■■■■□ 26.4
SDF4-203ENST00000403997 NPY5RQ15761 445 aa15.06■□□□□ 0
SDF4-203ENST00000403997 ZNF484Q5JVG2 852 aa15.06■□□□□ 0
SDF4-203ENST00000403997 FBXO47Q5MNV8 452 aa15.06■□□□□ 0
SDF4-203ENST00000403997 SPRED2Q7Z698 418 aa15.06■□□□□ 0
SDF4-203ENST00000403997 NME8Q8N427 588 aa15.06■□□□□ 0
SDF4-203ENST00000403997 NECAB1Q8N987 351 aa15.06■□□□□ 0
SDF4-203ENST00000403997 TOP1MTQ969P6 601 aa15.06■□□□□ 0
SDF4-203ENST00000403997 RIT2Q99578 217 aa15.06■□□□□ 0
SDF4-203ENST00000403997 ORC3Q9UBD5 711 aaPredicted RBP15.06■□□□□ 0
SDF4-203ENST00000403997 GABBR1Q9UBS5 961 aa15.06■□□□□ 0
SDF4-203ENST00000403997 MAFBQ9Y5Q3 323 aaPredicted RBP15.06■□□□□ 0
SDF4-203ENST00000403997 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
SDF4-203ENST00000403997 SMIM35A0A1B0GVV1 85 aa15.05■□□□□ -0
SDF4-203ENST00000403997 LINC01553A4QN01 128 aa15.05■□□□□ -0
SDF4-203ENST00000403997 WDR64B1ANS9 1081 aa15.05■□□□□ -0
SDF4-203ENST00000403997 GAS7O60861 476 aa15.05■□□□□ -0
SDF4-203ENST00000403997 TDP2O95551 362 aa15.05■□□□□ -0
SDF4-203ENST00000403997 Q4G0T1 1027 aa15.05■□□□□ -0
SDF4-203ENST00000403997 LRCH2Q5VUJ6 765 aa15.05■□□□□ -0
SDF4-203ENST00000403997 TSHZ1Q6ZSZ6 1077 aa15.05■□□□□ -0
SDF4-203ENST00000403997 KRT25Q7Z3Z0 450 aa15.05■□□□□ -0
SDF4-203ENST00000403997 BBXQ8WY36 941 aaPredicted RBP15.05■□□□□ -0
SDF4-203ENST00000403997 WASF1Q92558 559 aa15.05■□□□□ -0
SDF4-203ENST00000403997 SLC5A5Q92911 643 aa15.05■□□□□ -0
SDF4-203ENST00000403997 GJA10Q969M2 543 aa15.05■□□□□ -0
SDF4-203ENST00000403997 IL17RAQ96F46 866 aa15.05■□□□□ -0
SDF4-203ENST00000403997 TGS1Q96RS0 853 aaKnown RBP15.05■□□□□ -0
SDF4-203ENST00000403997 YME1L1Q96TA2 773 aa15.05■□□□□ -0
SDF4-203ENST00000403997 PHF20Q9BVI0 1012 aa15.05■□□□□ -0
SDF4-203ENST00000403997 TEKT3Q9BXF9 490 aa15.05■□□□□ -0
SDF4-203ENST00000403997 CELF4Q9BZC1 486 aaKnown RBP15.05■□□□□ -0
SDF4-203ENST00000403997 DISC1Q9NRI5 854 aa15.05■□□□□ -0
SDF4-203ENST00000403997 MTUS1Q9ULD2 1270 aa15.05■□□□□ -0
SDF4-203ENST00000403997 PTPRSQ13332 1948 aa15.05■□□□□ -0
SDF4-203ENST00000403997 UNC80Q8N2C7 3258 aa15.04■□□□□ -0
SDF4-203ENST00000403997 MICAL3Q7RTP6 2002 aa15.04■□□□□ -0
SDF4-203ENST00000403997 COL1A2P08123 1366 aa15.04■□□□□ -0
SDF4-203ENST00000403997 STK36Q9NRP7 1315 aa15.04■□□□□ -0
SDF4-203ENST00000403997 CYP3A7-CYP3A51PA0A087WV96 503 aa15.04■□□□□ -0
SDF4-203ENST00000403997 ENPP3O14638 875 aa15.04■□□□□ -0
SDF4-203ENST00000403997 CHMP2AO43633 222 aa15.04■□□□□ -0
SDF4-203ENST00000403997 CTDNEP1O95476 244 aa15.04■□□□□ -0
SDF4-203ENST00000403997 CYP3A7P24462 503 aa15.04■□□□□ -0
SDF4-203ENST00000403997 ERVK-21P61565 698 aa15.04■□□□□ -0
SDF4-203ENST00000403997 HTRA4P83105 476 aaPredicted RBP15.04■□□□□ -0
SDF4-203ENST00000403997 GRB10Q13322 594 aa15.04■□□□□ -0
SDF4-203ENST00000403997 ME3Q16798 604 aa15.04■□□□□ -0
SDF4-203ENST00000403997 INF2Q27J81 1249 aa15.04■□□□□ -0
SDF4-203ENST00000403997 KRT40Q6A162 431 aa15.04■□□□□ -0
SDF4-203ENST00000403997 AGO3Q9H9G7 860 aaKnown RBP15.04■□□□□ -0
SDF4-203ENST00000403997 GJB4Q9NTQ9 266 aa15.04■□□□□ -0
SDF4-203ENST00000403997 GINS2Q9Y248 185 aa15.04■□□□□ -0
SDF4-203ENST00000403997 MTCH2Q9Y6C9 303 aa15.04■□□□□ -0
SDF4-203ENST00000403997 CCDC194A0A1B0GVG4 234 aa15.03■□□□□ -0
SDF4-203ENST00000403997 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
SDF4-203ENST00000403997 LARGE1O95461 756 aa15.03■□□□□ -0
SDF4-203ENST00000403997 POU3F3P20264 500 aaPredicted RBP15.03■□□□□ -0
SDF4-203ENST00000403997 CD52P31358 61 aa15.03■□□□□ -0
SDF4-203ENST00000403997 SFNP31947 248 aa15.03■□□□□ -0
SDF4-203ENST00000403997 JAK3P52333 1124 aa15.03■□□□□ -0
SDF4-203ENST00000403997 SKIV2LQ15477 1246 aaKnown RBP15.03■□□□□ -0
SDF4-203ENST00000403997 LETM2Q2VYF4 491 aa15.03■□□□□ -0
SDF4-203ENST00000403997 MOXD1Q6UVY6 613 aa15.03■□□□□ -0
SDF4-203ENST00000403997 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
SDF4-203ENST00000403997 METTL13Q8N6R0 699 aa15.03■□□□□ -0
SDF4-203ENST00000403997 FAM167AQ96KS9 214 aa15.03■□□□□ -0
SDF4-203ENST00000403997 TSPYL2Q9H2G4 693 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms