RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FAHP16930 419 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 CD40P25942 277 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 GJA4P35212 333 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 GPR3P46089 330 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 NCKAP1LP55160 1127 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZBTB41Q5SVQ8 909 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 TMC5Q6UXY8 1006 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 TMC6Q7Z403 805 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 C14orf80Q86SX3 495 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 RTN4RL1Q86UN2 441 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 CILP2Q8IUL8 1156 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 LMBR1Q8WVP7 490 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 FOXRED1Q96CU9 486 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 FAXDC2Q96IV6 333 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 MENTQ9BUN1 341 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 QRSL1Q9H0R6 528 aaKnown RBP5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 CCM2LQ9NUG4 571 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 MKS1Q9NXB0 559 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 GABBR1Q9UBS5 961 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZNF180Q9UJW8 692 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 FAN1Q9Y2M0 1017 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 NUB1Q9Y5A7 615 aa5.2□□□□□ -1.58
HMGB1P17-201ENST00000403495 OR14I1A6ND48 311 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 ELL2O00472 640 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CYP17A1P05093 508 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 LPLP06858 475 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 OSMP13725 252 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZSCAN20P17040 1043 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CCND1P24385 295 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 SDHAP31040 664 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 SRSF2Q01130 221 aaKnown RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 TCIRG1Q13488 830 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 ACAP2Q15057 778 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 HSP90AB2PQ58FF8 381 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CD276Q5ZPR3 534 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CCDC62Q6P9F0 684 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZC3H14Q6PJT7 736 aaKnown RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 LRSAM1Q6UWE0 723 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 UNQ6494/PRO21346Q6UXR6 183 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 LIPIQ6XZB0 460 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZNF605Q86T29 641 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 STK32CQ86UX6 486 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 PNMA8AQ86V59 439 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CXorf67Q86X51 503 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 TPH2Q8IWU9 490 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 TRIM48Q8IWZ4 208 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CHPFQ8IZ52 775 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 EAF2Q96CJ1 260 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 TSPAN17Q96FV3 270 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 SLC2A13Q96QE2 648 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 MYL10Q9BUA6 226 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 RHOBTB2Q9BYZ6 727 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 CDH19Q9H159 772 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 DTLQ9NZJ0 730 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 BTBD7Q9P203 1132 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 PPP2R3BQ9Y5P8 575 aa5.19□□□□□ -1.58
HMGB1P17-201ENST00000403495 UBA6A0AVT1 1052 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 AOAHP28039 575 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 VIPR1P32241 457 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 MAPKAPK2P49137 400 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 RGS3P49796 1198 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 HTRA3P83110 453 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 SLC6A3Q01959 620 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 DBPQ10586 325 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 MYBPC3Q14896 1274 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 NR1I3Q14994 352 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 EPHA7Q15375 998 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 KCNMB1Q16558 191 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 CR1LQ2VPA4 569 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 TOR2AQ5JU69 321 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 GPR158Q5T848 1215 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRAMEF9Q5VWM5 478 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 TEPPQ6URK8 271 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 CD300LDQ6UXZ3 194 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 FRMD7Q6ZUT3 714 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 PROSER1Q86XN7 944 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 FAM126BQ8IXS8 530 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 C7orf31Q8N865 590 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 JPH3Q8WXH2 748 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 TOE1Q96GM8 510 aaKnown RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 LIN37Q96GY3 246 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 SCYL1Q96KG9 808 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 TUBGCP5Q96RT8 1024 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 SLC6A17Q9H1V8 727 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 LUC7LQ9NQ29 371 aaKnown RBP5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 ARHGAP28Q9P2N2 729 aa5.18□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRSS38A1L453 326 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 GOLGA6L22H0YM25 854 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 NFIBO00712 420 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 PRPF6O94906 941 aaKnown RBP5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 ABLIM3O94929 683 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 SNUPNO95149 360 aaKnown RBP5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 ZBTB7AO95365 584 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 MPIG6BO95866 241 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 ASGR2P07307 311 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 C8BP07358 591 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 GLI1P08151 1106 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 FNTBP49356 437 aa5.17□□□□□ -1.58
HMGB1P17-201ENST00000403495 MANFP55145 182 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms